Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq227 118 1e-20 seq195 107 2e-17 >seq227 Length=154821 Score = 118 bits (130), Expect = 1e-20 Identities = 106/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 || ||||| | || | || |||||||| || ||||||||| | ||||| || |||| Sbjct 55767 CTTTTTGAAATCATTTTGGCGGCCAACTATCTGGACATCAAGGCACTGCTTGACGTTGGC 55708 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 ||||| |||| |||||||||||||||||||||||||| || ||||||||||| || || Sbjct 55707 TGCAAAACTGTCGCCAACATGATCAAGGGCAAGTCGCCAGAAGAGATCCGCAAAACGTTC 55648 Query 1592288 AACATCAAGTACG 1592300 || ||| || ||| Sbjct 55647 AATATCCAGAACG 55635 >seq195 Length=280307 Score = 107 bits (118), Expect = 2e-17 Identities = 199/292 (68%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || ||| || |||||||| || || | ||| ||||| || |||||||| | ||||| || Sbjct 68792 GCCCTGATCAACGTAGCGTGCTGTATTGTTGAAGACACGAAGCATGGGGATCAGGCCATT 68733 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 || || |||||||| || | |||| || | ||| || | || || | Sbjct 68732 AGAGGTACCATTGGTGCCTGCAATATAGGATCCTGTGGCTCGAATGCAATGAGCATTGAG 68673 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 || || || || || | ||||||||| | ||||| ||||| ||||| || ||||| Sbjct 68672 ACCAATACCTCCAGCTGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATATATGCC 68613 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 |||||| ||| |||||||||| | | |||||| || || ||| || || | || Sbjct 68612 CTCGATACTGTCTTCCTTCATGTCGATCAAAAAGCATGAGGACAGTTGAGGTTGAGGTGT 68553 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATG 1630353 |||||| ||||| || || || | || |||||| ||| | |||||| Sbjct 68552 GCCGGCATTGAACAGTGTCGGTGAAGCGTGGGTGAAGCACTTTTGGGACATG 68501 Score = 93.3 bits (102), Expect = 5e-13 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCG 19104 |||| || ||||| || || || || |||||| || ||| || ||| || |||| Sbjct 62198 AGGATAGTATCGGAGGTACTGTTACCTGCGTGATCCGGAACTGTCCTATAGGTCTGGGCG 62257 Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164 |||| |||||||| || |||| || | ||| || || ||||||||| || ||||||| Sbjct 62258 AGCCATGCTTTGATAAACTCGAAGCAGAGCTTGCACATGCCATGCTGAGCATTCCGGCCA 62317 Query 19165 CCAAGGGATTCGAGATTGG 19183 ||||||| |||||||| || Sbjct 62318 CCAAGGGCTTCGAGATCGG 62336 Score = 91.5 bits (100), Expect = 2e-12 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 18086 GGGTCACCACCTTTGGCGAGTCGCACGGGGCGGGC-GTCGGCTGCATCATCGACGGCGTG 18144 |||| ||||||| |||||| || || | ||| | || || || ||| | || || || Sbjct 61482 GGGTGACCACCTATGGCGAATCTCATTGC-CGGTCTGTAGGATGTATCGTTGATGGTGTT 61540 Query 18145 CCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCG 18204 || || | ||| ||| | ||| | |||||||| || ||| || | |||| || ||| Sbjct 61541 CCTCCTGGTCTGCAACTCACAGAGTCGGACATCCAACCCCAGATGACTAGGCGTCGTCCG 61600 Query 18205 GGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGC 18264 || ||| || ||| |||||||||| || ||| ||||| || || || |||||| Sbjct 61601 GGACAGTCGGCCCTTACCACGCCGCGAAATGAGAAAGATCGTGTGGAGATTCATTCGGGC 61660 Query 18265 ACGGAGAACGGCCTCACGCTCGGC 18288 |||||| ||| | ||||||||| Sbjct 61661 ACGGAGTTCGGGATTACGCTCGGC 61684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107118027311786