Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq185 125 5e-24 seq42 107 1e-18 seq101 104 2e-17 >seq185 Length=319224 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| | || ||||| |||| ||| | ||||||||||||||||||||| |||||||| Sbjct 77402 CCTCCACGCAGTCTCAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGAC 77461 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || | || |||| || || ||||| ||||||||||| || ||||| |||| Sbjct 77462 AGTGTTCGTCCGTCCTCCAACTGTTTGCCGGCAAAGATCAGTCGCTGTTGGTCGGGCGGA 77521 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || |||||| | |||| || | || || Sbjct 77522 ATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCTGAGCTTTCCACT 77581 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || || ||||| || || || ||||| ||||| |||||||| Sbjct 77582 TCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 77628 Score = 105 bits (116), Expect = 4e-18 Identities = 156/219 (71%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||| |||||||| ||||||||||| | | | || |||| Sbjct 77873 AGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCGCTCAAGGTACGGCCATCT 77932 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || |||||||| || || || || || || | || | || |||||||| Sbjct 77933 TCAAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCC 77992 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || ||| |||||| |||| || || Sbjct 77993 TGAATCTTGGACTTGAC--AT--TGTCGATGGTGTCGCTGGACTCGACCTCAAGCGTGAT 78048 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 |||||| || || || ||||| || |||||||||||||| Sbjct 78049 GGTCTTGCCAGTAAGTGTCTTGACGAAGATCTGCATGAT 78087 >seq42 Length=56582 Score = 107 bits (118), Expect = 1e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | |||| |||||||| ||||| ||||| || || |||| | || Sbjct 29370 AGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCT 29311 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || |||||||| |||||||||||||| ||||||||||| | || | ||| |||||||| Sbjct 29310 TCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGAATCCCTTCCTTGTC 29252 >seq101 Length=409543 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| || || ||||| ||| |||| |||| || |||||||| |||||||||| Sbjct 84945 CCTTCTGGATATTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 84886 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||| |||||||| | || | || |||||||| | || || ||||| Sbjct 84885 TCAATCGCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGAATCTTGGACTTGACATTGT 84826 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | |||| || | |||||| || | ||| |||||||| |||||||||||||| || | Sbjct 84825 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 84766 Query 34968 AG 34969 || Sbjct 84765 AG 84764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691775899702