Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq185 89.7 5e-13 seq61 84.2 2e-11 >seq185 Length=319224 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || ||||| || || |||||||| ||| | || | |||||| | ||| || ||| Sbjct 77660 GTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCTTCCAATTGCTTGCCA 77719 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| ||||||||||||| || || ||||| |||||||| ||||| || || || Sbjct 77720 GCAAAGATCAGACGTTGTTGGTCCGGAGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTG 77779 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | | ||| || || | || | |||||||||||| | || Sbjct 77780 ACGTTGTCGATGGTGTCACTCGATTCAACCTCGAGCGTGATCGTCTTGCCGGTAAGCGTC 77839 Query 137395 TTTACGAATATTTGCAT 137411 || |||||||| ||||| Sbjct 77840 TTAACGAATATCTGCAT 77856 >seq61 Length=40645 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 50514 ATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGAC 50573 || ||||| |||||| |||| || || | ||||| |||||| | ||||||||| | | Sbjct 24781 ATTGAAAAGGAGTTTCTCACCGATGCCCTTCCCGTCGCATTGCTTGGCATGAACTCGAAG 24840 Query 50574 ATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAGCTGGG--ACAAC 50631 | ||||| |||||||||||||||| || ||| | ||| | | ||||| |||| Sbjct 24841 CTCATGTGTCAGTACATTGAGTTTGTCGCTGACCGCTTGCTCCTCGCCCTGGGCAACAAG 24900 Query 50632 CGAAATACTATAATGCACGTAACCCCTTTCCGTT 50665 || | |||| ||||| | |||||||| || || Sbjct 24901 CG--ACACTACAATGCGCAGAACCCCTTCCCATT 24932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488542424445600