Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq195 93.3 1e-13 >seq195 Length=280307 Score = 93.3 bits (102), Expect = 1e-13 Identities = 258/393 (66%), Gaps = 7/393 (2%) Strand=Plus/Plus Query 110605 CTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACAG 110664 ||||||| |||||| | | | |||| ||||| | | |||| | |||| ||| Sbjct 68659 CTGGAGGTATTGGTCTCAATGCTCATTGCATTCGAGCCACAGGATCCTATATTGCAGGCA 68718 Query 110665 CGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAAT 110724 | || ||| | || | ||| || | || ||| | | ||||||||| | || ||| | Sbjct 68719 CCAATGGTACCTCTAATGGCCTGATCCCCATGCTTCGTGTCTTCAACAATACAGCACGCT 68778 Query 110725 ATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTTGGC 110781 | || |||| || || || | | || | ||||||||||| ||||| || |||| Sbjct 68779 ACGTTGATCAGGGCGGCAACAAGCGTCCAGGTGCCTTTGCTATCTACCTCGAGCCATGGC 68838 Query 110782 ATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAG 110841 | | || | || || || | | || | || || || || ||||| |||| Sbjct 68839 ACGCGGACGTGTTCGACTTTCTGAACCTGAGAAAGAACCATGGCAAAGAAGAGGTCAGAG 68898 Query 110842 CACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGT--TCAAGA 110899 |||| || || || ||||| |||||| | | || || |||||| ||||||| |||| Sbjct 68899 CACGGGACTTGTTCTATGCCTTGTGGACTCCTGACTTGTTCATGGAACGTGTCGAGAAGA 68958 Query 110900 AAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGG 110959 | || | ||| | || | ||||||||| | |||||||| | ||||| ||||| Sbjct 68959 ACCAGGAA--TGGACACTCTTCTGTCCTCATGAGGCACCTGGTCTCGCCGATGTCTATGG 69016 Query 110960 AAAAGAGTTTGAAGACCTTTACGAAAAATATGA 110992 | ||||| | | ||| ||||| ||||| || Sbjct 69017 CGATGAGTTCAATGCCCTATACGAGAAATACGA 69049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186808876841938