Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq195 89.7 5e-13 seq185 86.0 6e-12 >seq195 Length=280307 Score = 89.7 bits (98), Expect = 5e-13 Identities = 186/271 (69%), Gaps = 12/271 (4%) Strand=Plus/Minus Query 138145 TTGAGGCCGATGCCGCCTCCGTGT-TTAGATATCATGGCACAATCGTTGAGAGTTCTATA 138203 ||||| || || || || | ||| || || |||||||| || ||||| || ||| Sbjct 68677 TTGAGACCAATACCTCCAGC-TGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATA 68619 Query 138204 GATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATAACACGACGACATTTGAGGCAT 138263 ||||| | || |||||||||| |||| || | | | || || |||| |||||| Sbjct 68618 TATGCCCTCGATACTGTCTTCCTTCATGTCGATCAAAAAGCATGAGGACAGTTGAGG--- 68562 Query 138264 TTTCA----TGCCAGCCGAGAATAGAGTGGGACTAGCGTGGGTAAA-CATTTTCGAGCGC 138318 || | |||| || ||| || || || ||||||||| || || ||| | | | Sbjct 68561 -TTGAGGTGTGCCGGCATTGAACAGTGTCGGTGAAGCGTGGGTGAAGCACTTTTGGGA-C 68504 Query 138319 ATCAATCTATATGACTCGATCGCACTCTCGATATCATCACCATGAATCTGAAGAGCGACA 138378 || | |||| | |||||| || | || | ||||||||| || || | || ||| Sbjct 68503 ATGAGGTTATACGTCTCGATGGCCTTTTCAACATCATCACCGTGGATGCCGACTGCCACA 68444 Query 138379 CGCATCAGCATGTGTTGAGGTCTCTCGACGA 138409 ||||| |||||||||||||||| |||| ||| Sbjct 68443 CGCATGAGCATGTGTTGAGGTCGCTCGGCGA 68413 >seq185 Length=319224 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| | || || || ||| | || || || | |||||| | || ||||| ||| Sbjct 78085 CATGCAGATCTTCGTCAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAG 78026 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||| || ||||| | || || || ||| || || || || || || || ||||| Sbjct 78025 CGACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGCATTCCCCCGGATCA 77966 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 || | ||||||| || |||||||||||| ||||||| | | | ||||| || || Sbjct 77965 ACAGCGTCTCATTTTCGCCGGCAAACAACTTGAAGATGGCCGTACCTTGAGCGACTATAA 77906 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGT 25383 || || || ||||| ||| |||| || || Sbjct 77905 CATCCAGAAGGAATCTACCCTTCACTTGGT 77876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445092964570560