Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq61 105 5e-18 >seq61 Length=40645 Score = 105 bits (116), Expect = 5e-18 Identities = 231/340 (68%), Gaps = 7/340 (2%) Strand=Plus/Plus Query 43950 GGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGT 44009 |||||||| | || || || ||||| || || ||||||||||||||||| || || | Sbjct 24374 GGTTTCAAGTCATGATGGAGAACATTCACTCTGAGATGTACAGTCTTCTGATTGACACCT 24433 Query 44010 ACATCAAAGATGGGCACGAGAAGCATCGAT-TGTTTAATGCGATAGAAACAGTACCTGCG 44068 | | || ||| | |||||| | || ||||| | || | || || | ||| Sbjct 24434 ATGTGAAGGATCCCAAAGAGAAG-ACGTATCTGTTTGACGCCGTCGACACGATCCCTTGC 24492 Query 44069 ATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA-ATTCAAATGATTCT---TTTGG 44124 ||| | |||||||||||||| | |||||| | |||| || || |||| Sbjct 24493 ATTCGCAAGAAAGCAGACTGGGCTTTGCGATGGATCTCAGACAAA-GAGTCGAGCTTTGC 24551 Query 44125 AGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGC 44184 |||| || || || || || | ||| |||||||| ||||| || ||||||||||| | Sbjct 24552 TCAACGTCTGGTTGCTTTCGCTGCTGTCGAAGGCATCTTCTTCTCTGGATCGTTTGCATC 24611 Query 44185 CATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAAT 44244 ||| || ||| | |||| ||| | |||||||| | || || || || ||| | || Sbjct 24612 CATCTTCTGGCTGAAGAGCAAGGGTCTCATGCCTGGCCTCACCTTCTCCAACGAGCTCAT 24671 Query 44245 AAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG 44284 ||||||||| ||| | ||| || ||||| ||| || Sbjct 24672 CTCTCGTGATGAGGGCATGCATACGGACTTTGCATGCCTG 24711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454750249290