Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq185 111 1e-19 seq195 107 2e-18 >seq185 Length=319224 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||||||||| | || | ||||| || | ||||| || || || || || ||||||| Sbjct 77856 TGCCTCCGCGGAGACGAAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCGC 77915 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 ||| | | || | ||||| || ||||| |||||| |||||||||||||||||||||| | Sbjct 77916 TCAAGGTACGGCCATCTTCAAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGATCCGGGG 77975 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || |||||| || | | || | ||||| ||| || | Sbjct 77976 GAATGCCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGA 78035 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | ||||| || || || || || ||||| ||||| Sbjct 78036 CCTCAAGCGTGATGGTCTTGCCAGTAAGTGTCTTGACGAAGATCTGCAT 78084 >seq195 Length=280307 Score = 107 bits (118), Expect = 2e-18 Identities = 356/548 (65%), Gaps = 7/548 (1%) Strand=Plus/Minus Query 131638 GTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCT 131697 ||||| || || || | ||| ||||| || || ||| || || || |||| || | Sbjct 68960 GTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAAGGCATAGAACAAGTCCCG 68901 Query 131698 AGCTTTTTTCTCTTCTGTACCCATAAtttttt-tCAAATTTAAAAAGTCCAAAATGTCCG 131756 ||| | ||||||| | || || || ||| ||| || | |||||| || | ||||| Sbjct 68900 TGCTCTGACCTCTTCTTTGCC-ATGGTTCTTTCTCAGGTTCAGAAAGTCGAACACGTCCG 68842 Query 131757 CATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTTA---CCGCCTTGATTAA 131813 | ||||| || || | || | || | || ||| ||||| ||||| |||| || Sbjct 68841 CGTGCCATGGCTCGAGGTAGATAGCAAAGGCACCTGGACGCTTGTTGCCGCCCTGATCAA 68782 Query 131814 CATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCAT 131873 | | || | | |||||| | || || | |||||| || || || | | | |||| Sbjct 68781 CGTAGCGTGCTGTATTGTTGAAGACACGAAGCATGGGGATCAGGCCATTAGAGGTACCAT 68722 Query 131874 TGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTC 131933 |||||| ||| ||| || |||||| || ||| | ||||| |||||||||| Sbjct 68721 TGGTGCCTGCAATATAGGATCCTGTGGCTCGAATGCAATGAGCATTGAGACCAATACCTC 68662 Query 131934 C-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTG 131992 | || || || ||||| | ||||| | | || |||| ||| || || || | ||| Sbjct 68661 CAGCTGT-CTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATATATGCCCTCGATACTG 68603 Query 131993 TCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGCTGAA 132052 || | ||||||| |||||||| ||||||| || | ||| ||||||||| Sbjct 68602 TCTTCCTTCATGTCGATCAAAAAGCATGAGGACAGTTGAGGTTGAGGTGTGCCGGCATTG 68543 Query 132053 AACAATGTGGGGCTGGCGTGTGTAAAAAGTTTTTTGGCCATGCACCGATACGATTGTATA 132112 |||| ||| || ||||| || || |||| || |||| ||||| | || Sbjct 68542 AACAGTGTCGGTGAAGCGTGGGTGAAGCACTTTTGGGACATGAGGTTATACGTCTCGATG 68483 Query 132113 GCGGACTCGATATCGCCCAGATGTATGGTCAATGCGACCCGCATGTACATGTGTTGAATG 132172 || || | ||| | || ||| | ||| || |||||| |||||||||| Sbjct 68482 GCCTTTTCAACATCATCACCGTGGATGCCGACTGCCACACGCATGAGCATGTGTTGAGGT 68423 Query 132173 CGCTCGGC 132180 |||||||| Sbjct 68422 CGCTCGGC 68415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933063846896