Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq94 224 3e-53 seq243 147 7e-30 seq185 123 8e-23 >seq94 Length=18822 Score = 224 bits (248), Expect = 3e-53 Identities = 495/737 (67%), Gaps = 10/737 (1%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || |||||| |||||||||| || || ||||| | || | | | |||| || Sbjct 786 GCCATCGGTATCGATCTAGGTACTACCTACTCATGTGTGGGCGTCTTCCGAGATGACCGC 727 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | || || || || || || || || ||| | || || || || | |||||| || ||| Sbjct 726 ATCGAGATCATCGCCAACGACCAGGGCAACCGGACTACCCCCTCGTTCGTTGCTTTCACC 667 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| ||||||| ||| | ||||| || |||| || || || | || Sbjct 666 GACACAGAGCGTCTGATTGGCGATGCCGCAAAGAACCAAGTCGCGATGAACCCCCACAAC 607 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACA---AATCTACACAA 349435 || || ||||| || |||||||| |||||| | | || ||| || | ||| Sbjct 606 ACCGTCTTTGACGCCAAGCGACTGATTGGTCGTAAATTCAACGACGCCGAAGTT---CAA 550 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 | ||| | || || || || || | |||||| | || |||| || || | || Sbjct 549 GCCGATATGAAGCACTTCCCCTTCAAGGTTGTTG--ACAGG-GGTGGCAAGCCTGTCATC 493 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555 |||| || | ||||| ||| | || | || ||||||||| || || || ||||| Sbjct 492 CAGGTGGAGTTCAAAGGCGAAGAGAAGCTGTTCACACCCGAAGAGATCTCCTCCATGGTC 433 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 || || |||| |||| ||| || |||| | |||| ||||| | | || || Sbjct 432 TTGACCAAGATGAGAGAAACTGCGGAGTCATACCTCGGTGGCACAGTCAACAACGCAGTC 373 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 |||||||| || ||||| || || || ||||||| || || || |||||||| Sbjct 372 ATTACTGTCCCTGCCTACTTCAACGACTCCCAGCGCCAAGCCACCAAGGATGCTGGTCTG 313 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 || || || | || || || | || || || || ||||||||||| || ||||| || Sbjct 312 ATCGCCGGCCTCAACGTCCTGCGTATCATCAACGAGCCCACTGCTGCCGCCATTGCCTAC 253 Query 349736 GGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 || || || || | | ||| || ||| | || || || || | ||||||||| Sbjct 252 GGTCTGGACAAGAAGGCTGAGGGCGAGCGCAATGTCCTCATCTTCGACCTTGGTGGTGGT 193 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 ||||| ||||| ||||| || || | || || || || || ||||| || | || || Sbjct 192 ACTTTCGATGTCTCACTCCTGACCATCGAGGAAGGTATCTTCGAAGTCAAGTCTACCGCC 133 Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915 || ||||| || || ||||| || || || || || ||||| || || || || || Sbjct 132 GGCGATACTCACCTGGGTGGTGAGGACTTCGACAACCGTCTTGTCAACCACTTCGTAAAC 73 Query 349916 GAATTTAAGCGTCAAGC 349932 ||||| || || ||||| Sbjct 72 GAATTCAAACG-CAAGC 57 >seq243 Length=136071 Score = 147 bits (162), Expect = 7e-30 Identities = 247/357 (69%), Gaps = 3/357 (1%) Strand=Plus/Minus Query 349531 ACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTT 349590 |||||||||||| || | |||||| | | || ||||||||| |||| || ||||| || Sbjct 63614 ACCCGAAGAAATCTCCGCCATGGTTCTGGGCAAGATGAAGGAAGTTGCAGAGGCATACTT 63555 Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 || | | ||| || | || || | || || || || || || || || || ||||| Sbjct 63554 GGGCAAGAAAGTTACCCACGCGGTCGTCACAGTCCCGGCATACTTCAACGACGCTCAGCG 63495 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 || || || |||||||| | || || || || | ||| || | || |||| || Sbjct 63494 ACAAGCCACCAAGGATGCTGGTACTATCGCCGGATTGACTGTCCTGCGTGTGGTTAACGA 63435 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTAT 349770 || ||||| ||||| ||||| ||||| ||||| || || | | | || | | || Sbjct 63434 GCCGACTGCCGCAGCCATTGCCTATGGCCTTGACAA---GAAGGGCAAGGAGAGCCAGAT 63378 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 || | | ||| | |||||||| ||||| ||||| || || || || ||||||| || Sbjct 63377 CATTGTCTACGATCTTGGTGGTGGCACTTTCGATGTTTCCCTTCTCTCAATTGAAGACGG 63318 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 |||| || || || || || ||||| || ||||| ||||| |||||||| || Sbjct 63317 CGTTTTCGAGGTCTTGGCTACCGCCGGTGACACTCATCTCGGTGGTGAAGATTTCGA 63261 >seq185 Length=319224 Score = 123 bits (136), Expect = 8e-23 Identities = 157/212 (74%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 140527 GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTT 140586 || |||| ||||| ||||| || || || || ||||| || || || || ||||||| Sbjct 77875 GACCAAG-TGAAGGGTAGATTCCTTCTGGATGTTATAGTCGCTCAAGGTACGGCCATCTT 77933 Query 140587 CAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCT 140646 |||||||||| || || || || ||||| || ||||| || ||||| ||||| || |||| Sbjct 77934 CAAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCCT 77993 Query 140647 GAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TTCAACTTCAAGTGTAACTGTC 140705 |||| || | || ||||| || || | || | ||| || || ||||| || | ||| Sbjct 77994 GAATCTTGGACTTGACATTGTCGATGGTGTC-GCTGGACTCGACCTCAAGCGTGATGGTC 78052 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || ||||| || || || |||||||| Sbjct 78053 TTGCCAGTAAGTGTCTTGACGAAGATCTGCAT 78084 Score = 114 bits (126), Expect = 4e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| || || | | || || ||||| || || || || || || || || || || Sbjct 77626 CATACCTCCGCGAAGCCGGAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTC 77685 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || ||||| | ||| || ||||||||||| |||||||| || || || Sbjct 77686 GGAGAGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCCGG 77745 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 |||||| ||||| || || || || || ||| || || || || || | ||| | || Sbjct 77746 AGGAATGCCTTCCTTGTCTTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCACTCGATT 77804 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| || || || | ||||| ||||| || || || || || |||||||| Sbjct 77805 CAACCTCGAGCGTGATCGTCTTGCCGGTAAGCGTCTTAACGAATATCTGCAT 77856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515249391137174