Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq195 154 2e-32 seq135 154 2e-32 >seq195 Length=280307 Score = 154 bits (170), Expect = 2e-32 Identities = 456/698 (65%), Gaps = 4/698 (1%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 |||||||| || | ||| |||||||| ||| || ||||| | || || |||||||| Sbjct 68487 GAGACGTATAACCTCATGTCCCAAAAGTGCTTCACCCACGCTTCACCGACACTGTTCAAT 68546 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 || || || ||| ||||| |||| ||||| || | | |||||||| ||| Sbjct 68547 GCCGGCACACCTCAACCTCAACTGTCCTCATGCTTTTTGATCGACATGAAGGAAGACAGT 68606 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 ||||| ||||| || || || |||||| || ||| ||||||||| | || ||| Sbjct 68607 ATCGAGGGCATATATGACACCCTCAAGACCTGCGCCATGATCTCCAAGACAGCTGGAGGT 68666 Query 53423 ATCGGTATCCACTGCTCGAA-CGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 || ||| || | ||||| | | || || | || | || || || || || Sbjct 68667 ATTGGTCTCAA-TGCTCATTGCATTCGAGCCACAGGATCCTATATTGCAGGCACCAATGG 68725 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | | |||| | | || ||||| || ||||||||||| || || || ||||| | Sbjct 68726 TACCTCTAATGGCCTGATCCCCATGCTTCGTGTCTTCAACAATACAGCACGCTACGTTGA 68785 Query 53542 CCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCG 53600 ||||| || ||||| | ||| | | || || |||||||||||||| |||||||| | Sbjct 68786 TCAGGGCGGCAACAAGCGTCCAGGTG-CCTTTGCTATCTACCTCGAGCCATGGCACGCGG 68844 Query 53601 ACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTG 53660 || | | || ||||| | ||| | ||| || || | |||||| | | || | Sbjct 68845 ACGTGTTCGACTTTCTGAACCTGAGAAAGAACCATGGCAAAGAAGAGGTCAGAGCACGGG 68904 Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720 || |||| || |||||| ||| ||| | |||||| || || |||||| || ||| Sbjct 68905 ACTTGTTCTATGCCTTGTGGACTCCTGACTTGTTCATGGAACGTGTCGAGAAGAACCAGG 68964 Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780 | ||| || | || || | ||| || || ||| | |||||| || || |||| Sbjct 68965 AATGGACACTCTTCTGTCCTCATGAGGCACCTGGTCTCGCCGATGTCTATGGCGATGAGT 69024 Query 53781 TTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGC 53840 | || | | || || |||| |||| || ||| |||||||| | Sbjct 69025 TCAATGCCCTATACGAGAAATACGAGAGGGAGGGTCGTGGTCGCCAGACTGTCAAGGCTC 69084 Query 53841 GTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCT 53900 || | ||| |||| || ||| || || || || || ||||| |||||| || Sbjct 69085 AGAAGCTCTGGTATGCTATTCTCGAGGCACAAACCGAAACCGGTACGCCTTACATGCTCT 69144 Query 53901 ACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 |||| ||| | |||| |||||||||||||||||| Sbjct 69145 ACAAAGATGCCTGCAACAGAAAGAGCAACCAGAAGAAC 69182 Score = 84.2 bits (92), Expect = 2e-11 Identities = 104/141 (74%), Gaps = 6/141 (4%) Strand=Plus/Plus Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 || ||||||||||| | |||||| ||||| || || || |||||| | || || | || Sbjct 70014 GCGGATCGTGGTGCATTCATCGATCAGTCTCAATCCCTCAACATCCACTTGAAGGAGCCA 70073 Query 55847 TCACTGGCCAAGTT---GAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACG 55903 | ||| |||| | |||| ||||||||| || ||||| | ||| |||||||| Sbjct 70074 ACCATGGGCAAGATTACGAGC---ATGCACTTTGCAGGCTGGAAAATGGGCCTCAAGACC 70130 Query 55904 GGTATGTACTATCTGCGGACC 55924 || |||||||| ||||| ||| Sbjct 70131 GGCATGTACTACCTGCGTACC 70151 >seq135 Length=372962 Score = 154 bits (170), Expect = 2e-32 Identities = 219/302 (73%), Gaps = 6/302 (2%) Strand=Plus/Minus Query 117302 CGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAAT 117361 || |||||||||||||| | |||||||| ||| | || || || ||||| ||| Sbjct 281679 CGGGTGAAAATGTAACGGGCGCTTGCAGAATCGCTACCGCCCTGGTTTCGGGTACCAAAT 281620 Query 117362 TGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTG 117421 || ||| || |||| | ||| | |||||| | || ||||||||||| ||||| Sbjct 281619 TGGCCAGAAGGTTCCAGTAAGTTGACGTTGTTCGATCCGACAAAGTTTTGCGCCAATCCA 281560 Query 117422 ACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCA--CGT 117479 |||||||| |||||| | ||||| ||||||||||||||| || ||| | | Sbjct 281559 ACAATCGTCTGTTGGAGAGATGTTTCACCGTGGTGATACGCCGTCATA-CCACCAACCAT 281501 Query 117480 AGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAA 117539 | |||||||||| ||| |||||||| || | | | || ||||| ||||||||| | Sbjct 281500 A-CCCGCCAGCTCAGCAACCTTCATATCCTTCTTTAAATTGCGCTTGAAGCAGGCATACA 281442 Query 117540 TCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGA-GGGATCGAACGCTTGATG 117598 | || || ||||||| ||||||||||||||| |||| ||| ||||| || || || || Sbjct 281441 TGACTTTTCGCTGACCGGGCTTCAGACCATCCACCAC-TGAGGGGATGGATCGGATGTTG 281383 Query 117599 TC 117600 || Sbjct 281382 TC 281381 Score = 109 bits (120), Expect = 6e-19 Identities = 299/447 (67%), Gaps = 17/447 (4%) Strand=Plus/Minus Query 151868 AGCTGAATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGG 151927 |||| | || || ||||| || || ||||||||||| || | ||| || ||||| || Sbjct 281837 AGCTCCAGCCCGTGCCGATACCATCGGCACCGTTGACAAGGACCATGGGGACAATCGGTA 281778 Query 151928 CGTAAAACTCCGGCTCCA-CCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTG 151986 |||| | ||| || || | ||| ||| | ||||| | ||| | | || | Sbjct 281777 CGTATACCTCAGGTTCAATCCTCTTGTCA-TCATCAAGGTTGTAGGAGAGCAGGGGTTCA 281719 Query 151987 TCAGCCGGATCGAATA--TCCGTCGAGTCATAGGACTCAAAC-GCGTGAAGATGTATCGG 152043 || || | | ||||| | | | | || ||| | ||| | ||||| ||||| ||| Sbjct 281718 TCGGCTTGGTGGAATAGTTTCCTTG---CAAAGGGCGATAACCGGGTGAAAATGTAACGG 281662 Query 152044 GAGCTGGCCGCATCCTTGCCACCTGCCAGC---CGCGTTCCAAACTGTCCAGAGGGCTCG 152100 | ||| || | ||| || ||| || | || || ||||| || ||||| || || Sbjct 281661 GCGCTTGCAGAATC---GCTACCGCCCTGGTTTCGGGTACCAAATTGGCCAGAAGGTTCC 281605 Query 152101 AGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGC 152160 || | ||||| |||||| | || || || || || ||||| |||||||| || Sbjct 281604 AGTAAGTTGACGTTGTTCGATCCGACAAAGTTTTGCGCCAATCCAACAATCGTCTGTTGG 281545 Query 152161 AGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT-CCCGCCAACTGCGC 152219 ||| | |||||||||||||||||||||| || | | || ||||||| || || Sbjct 281544 AGAGATGTTTCACCGTGGTGATACGCCGTC-ATACCACCAACCATACCCGCCAGCTCAGC 281486 Query 152220 CACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGA 152279 |||||||| ||| || | | || ||||| ||||| || || || || ||||| Sbjct 281485 AACCTTCATATCCTTCTTTAAATTGCGCTTGAAGCAGGCATACATGACTTTTCGCTGACC 281426 Query 152280 TGGTTTCAAACCGTCCACCACGTGAGG 152306 || |||| ||| |||||||| ||||| Sbjct 281425 GGGCTTCAGACCATCCACCAC-TGAGG 281400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214235228400