Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq185 140 2e-28 >seq185 Length=319224 Score = 140 bits (154), Expect = 2e-28 Identities = 161/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 || |||||| || || ||||||||||| |||||||| || || || |||||||| |||| Sbjct 77416 CAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGACAGTGTTCGTCCGTC 77475 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 || | ||||| |||||||| || | ||||||||||| ||||| | ||||||||||| Sbjct 77476 CTCCAACTGTTTGCCGGCAAAGATCAGTCGCTGTTGGTCGGGCGGAATACCCTCCTTGTC 77535 Query 34614 TGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672 | ||| || | || ||| | || |||||| ||| |||||||||| || |||| Sbjct 77536 T-TGAATCTTGGACTTGACGTTGTCGATCGTGTCTGAGCTTTCCACTTCCAGTGTAATCG 77594 Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || || | || || ||||| |||||||| Sbjct 77595 TCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 77628 Score = 89.7 bits (98), Expect = 3e-13 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| || | || | |||||| || ||||| || ||||| || || || Sbjct 77630 CCTCCGCGAAGCCGGAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAG 77689 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || ||||||| | ||| || || ||||| || | ||| ||||||||||| || Sbjct 77690 AGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCCGGAGGA 77749 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657 | || ||||||||| |||| || | || ||| | || ||||| ||| | || | Sbjct 77750 ATGCCTTCCTTGTCTTGGATC-TTGCTCTTGACGTTGTCGATGGTGTCACTCGAT-TCAA 77807 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | || ||||| || ||||| | ||| || || || ||||||||| Sbjct 77808 CCTCGAGCGTGATCGTCTTGCCGGTAAGCGTCTTAACGAATATCTGCATG 77857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728610372114