Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq185 134 1e-26 seq101 93.3 4e-14 >seq185 Length=319224 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || || || |||||| | ||||| || ||||||||| || Sbjct 77628 ATGCAGATATTTGTCAAGACACTTACTGGCAAGACGATTACACTGGAAGTGGAAAGCTCA 77569 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || ||||||||||| || || || || ||||| ||| Sbjct 77568 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCGCCCGACCAA 77509 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||||| ||||| ||| | || | || || |||||| Sbjct 77508 CAGCGACTGATCTTTGCCGGCAAACAGTTGGAGGACGGACGAACACTGTCGGACTACAAC 77449 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| |||||| ||| | || ||||| || | |||| || || Sbjct 77448 ATTCAGAAGGAGAGCACCCTGCACTTGGTGCTGAGACTGCGTGGAGG 77402 Score = 122 bits (134), Expect = 8e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||||||||| || || || || ||||||||| | || || || || || ||| || Sbjct 77857 CATGCAGATATTCGTTAAGACGCTTACCGGCAAGACGATCACGCTCGAGGTTGAATCGAG 77798 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | ||||| || || |||||||| |||||||| || || || || Sbjct 77797 TGACACCATCGACAACGTCAAGAGCAAGATCCAAGACAAGGAAGGCATTCCTCCGGACCA 77738 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| ||| | || | || ||||| |||||||||||| | ||| | ||||| ||||| Sbjct 77737 ACAACGTCTGATCTTTGCTGGCAAGCAATTGGAAGACGGCCGTACCCTCTCCGACTACAA 77678 Query 27167 CATTCAAAAGGAGTCGACCTTACAT 27191 ||| || ||||| || ||| | ||| Sbjct 77677 CATCCAGAAGGAATCAACCCTCCAT 77653 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || |||||| | || || ||||| || || | Sbjct 78085 CATGCAGATCTTCGTCAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAG 78026 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | ||||| || ||||| ||||| |||||||| || || ||||| Sbjct 78025 CGACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGCATTCCCCCGGATCA 77966 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||||| | || | ||||||||||||| | ||||| | ||| | ||| || || Sbjct 77965 ACAGCGTCTCATTTTCGCCGGCAAACAACTTGAAGATGGCCGTACCTTGAGCGACTATAA 77906 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||| || ||| | || ||||| | ||| | || || ||||| Sbjct 77905 CATCCAGAAGGAATCTACCCTTCACTTGGTCCTTCGTCTCCGCGGAGGCAT 77855 >seq101 Length=409543 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || || || || || |||||| | || || || || || || |||||||| |||| Sbjct 84765 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 84824 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || ||||||||||| |||||||| ||||| || || ||||| || Sbjct 84825 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGCATCCCACCTGACCAGCAGCGATTG 84884 Query 27117 ATATACGCCGGCAAACAATTGGAAGA 27142 || | ||||||||| ||| | || || Sbjct 84885 ATCTTCGCCGGCAAGCAACTTGAGGA 84910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434916997388160