Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq185 174 4e-38 seq101 116 9e-21 seq195 114 3e-20 seq42 107 4e-18 >seq185 Length=319224 Score = 174 bits (192), Expect = 4e-38 Identities = 171/221 (77%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| || || || || || || || |||||||| || || | ||||| Sbjct 77636 CGAAGCCGGAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTA 77695 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || ||||||| |||||||| || ||||| || ||||||||||| ||||||| ||| Sbjct 77696 CGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCCGGAGGAATGCCT 77755 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| |||||||| || ||||| |||||||||||| |||||||||||| Sbjct 77756 TCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCACTCGATTCAACCTCGAGC 77815 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||| || || || ||||| || || | |||||| Sbjct 77816 GTGATCGTCTTGCCGGTAAGCGTCTTAACGAATATCTGCAT 77856 Score = 138 bits (152), Expect = 3e-27 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961 ||||| | |||||| || || || || ||||||||||| || | ||| ||| | ||||| Sbjct 77873 AGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCGCTCAA-GGTACGGCCATC 77931 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 ||| || || ||||| ||||| || || || ||||| || || |||| ||||||||||| Sbjct 77932 TTCAAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTC 77991 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||| ||||| || || || ||||||||||| | || ||||| || ||||| || Sbjct 77992 CTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGCGTGATGGT 78051 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || || ||||| || || | |||||| Sbjct 78052 CTTGCCAGTAAGTGTCTTGACGAAGATCTGCAT 78084 >seq101 Length=409543 Score = 116 bits (128), Expect = 9e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || ||||| || || || ||||| | ||||| || || |||||||| |||||||| Sbjct 84943 TTCTGGATATTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 84884 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || |||||||| || | ||||||||||| || ||||| || || || ||| Sbjct 84883 AATCGCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 84824 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| || || |||||||| ||||| ||||| |||||||| ||||| || || Sbjct 84823 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 84765 >seq195 Length=280307 Score = 114 bits (126), Expect = 3e-20 Identities = 192/278 (69%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATT 178147 || |||||||| ||||||||||||||| |||||||||||| ||| | ||| | Sbjct 69187 CCCAAGTTCTTCTGGTTGCTCTTTCTGTTGCAGGCATCTTTGTAGAGCATGTAAGGCGTA 69128 Query 178148 CCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTT 178207 || || | ||| ||| ||||||| || ||| |||| ||| || |||||||| Sbjct 69127 CCGGTTTCGGTTTGTGCCTCGAGAATAGCATACCAGAGCTTCTGAGCCTTGACAGTCTGG 69068 Query 178208 TTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACA 178267 | || || ||||||| || | ||| || | | ||| || ||||||||| Sbjct 69067 CGACCACGACCCTCCCTCTCGTATTTCTCGTATAGGGCATTGAACTCATCGCCATAGACA 69008 Query 178268 TCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACT 178327 || ||||||| || ||||||| || |||||||| |||| | || | || || Sbjct 69007 TCGGCGAGACCAGGTGCCTCATGAGGACAGAAGAGTGTCCATTCCTGGTTCTTCTCGACA 68948 Query 178328 CGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 |||| |||||| | ||||| ||||| | ||||||||| Sbjct 68947 CGTTCCATGAACAAGTCAGGAGTCCACAAGGCATAGAA 68910 >seq42 Length=56582 Score = 107 bits (118), Expect = 4e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| ||||| || ||||| || || |||||||| || || | || || Sbjct 29380 ACGAAGACGGAGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGT 29321 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || ||||| || |||||||| |||||||| |||||||| ||||| || |||| || Sbjct 29320 GCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGAATCCC 29261 Query 211013 TTCCTTGTC 211021 ||||||||| Sbjct 29260 TTCCTTGTC 29252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159148168278170