Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq185 141 2e-28 seq42 118 3e-21 seq84 114 3e-20 seq101 107 5e-18 >seq185 Length=319224 Score = 141 bits (156), Expect = 2e-28 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||| || ||||| || ||||| || |||| ||||| |||| | || Sbjct 77636 CGAAGCCGGAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTA 77695 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || ||||| | ||||| ||||| ||||| || ||||||||||| || ||||| ||| Sbjct 77696 CGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCCGGAGGAATGCCT 77755 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| ||| || ||||||||||| | ||| || || | | Sbjct 77756 TCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCACTCGATTCAACCTCGAGC 77815 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||| || | || || | ||| | ||||| Sbjct 77816 GTGATCGTCTTGCCGGTAAGCGTCTTAACGAATATCTGCAT 77856 Score = 136 bits (150), Expect = 9e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| |||||||| || | ||| || ||| || || || | ||||| || | || || Sbjct 77407 ACGCAGTCTCAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGACAGTGT 77466 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || | ||| || || || ||||| ||||| |||||||||||||||||||| Sbjct 77467 TCGTCCGTCCTCCAACTGTTTGCCGGCAAAGATCAGTCGCTGTTGGTCGGGCGGAATACC 77526 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| ||||| ||| || ||||| ||||||||| ||||||| || | Sbjct 77527 CTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCTGAGCTTTCCACTTCCAG 77586 Query 225672 CGTGATCGTCTTGCCCGT 225689 || ||||||||||| || Sbjct 77587 TGTAATCGTCTTGCCAGT 77604 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| || || ||||| || |||| || || ||| ||| || | |||||| Sbjct 77873 AGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCGCTCAAGGTACGGCCATCT 77932 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || || ||||| || || || ||||| || || ||||| ||||||||||| Sbjct 77933 TCAAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCC 77992 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| ||||||||||| || || || || | |||||| ||| Sbjct 77993 TGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGCGTGATGGTC 78052 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 78053 TTGCCAGTAAGTGTCTTGACGAAGATCTGCAT 78084 >seq42 Length=56582 Score = 118 bits (130), Expect = 3e-21 Identities = 104/130 (80%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| |||||||| |||||||| || |||| ||||| |||| | ||| Sbjct 29380 ACGAAGACGGAGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGT 29321 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| || ||||| || |||||||| || ||||| |||||||| ||||| || Sbjct 29320 GCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGAATCCC 29261 Query 225612 TTCCTTGTCT 225621 |||||||||| Sbjct 29260 TTCCTTGTCT 29251 >seq84 Length=24521 Score = 114 bits (126), Expect = 3e-20 Identities = 190/274 (69%), Gaps = 3/274 (1%) Strand=Plus/Minus Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499 ||| ||||||||||| |||| || ||||| ||| | ||||| ||||| | | Sbjct 12023 AACATTATATTTAATGTTTGCTGTATTTTCAGGTTTAGCTGGTACAGCTTTTTCAGTATT 11964 Query 7500 TATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTA 7559 ||||| ||||||||| | | ||| || ||| | | | |||| ||| | || Sbjct 11963 AATAAGATTAGAATTATCAGGTCCTGGAGTACAATTCATAGCAGATAAT---CAATTATA 11907 Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTAT 7619 || ||| || || || ||||| | || |||||||||||| | || ||||| | | Sbjct 11906 TAATAGTATAATAACAGCTCATGCTATAGTAATGATTTTCTTTATGGTAATGCCTGCCTT 11847 Query 7620 GATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTT 7679 ||||| ||||| || |||| || | || |||||||| || | ||| |||||||| || Sbjct 11846 AATAGGTGGTTTTGGTAATTTCTTATTACCATTAATGATAGGAGGTCCAGATATGGCATT 11787 Query 7680 TCCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 || || | || ||||||||||| |||||| || Sbjct 11786 CCCTAGATTAAATAATATAAGTTTCTGATTATTA 11753 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| || || ||||| |||||||| | |||||| || || |||||||| ||||| |||| Sbjct 11342 TTCTGGGTGTCCAAAGAATCAGAAAAGATGTTGGTATAGTATAGGATCTCCTCCTCCTGC 11401 Query 370732 TGGATCAAA-AAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773 | ||||| |||| | ||||||||||||||||| |||||||| Sbjct 11402 TACTTCAAAGAAAGAT-GTATTAAAATTTCTATCTGTTAAAAC 11443 >seq101 Length=409543 Score = 107 bits (118), Expect = 5e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| |||||| ||| || || | ||||| || || ||||| || |||||||| Sbjct 84943 TTCTGGATATTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 84884 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | ||| || ||||| || || || |||||||||||||| ||||| ||| ||| ||| Sbjct 84883 AATCGCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 84824 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || ||||| || | || || || | ||||| ||||||||||| Sbjct 84823 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 84780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192527257939052