Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq101 91.5 3e-13 seq185 84.2 5e-11 >seq101 Length=409543 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||| ||||| ||| | || | ||||| || || || ||||||||||| Sbjct 84943 TTCTGGATATTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 84884 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 | | ||||||||| | | ||| |||||||| |||||||| || |||||| | || Sbjct 84883 AATCGCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 84824 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | |||| || ||| || || || || || || ||||||||||| ||||| |||||| Sbjct 84823 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 84764 >seq185 Length=319224 Score = 84.2 bits (92), Expect = 5e-11 Identities = 149/216 (69%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| || || || || || ||||||||||| |||| | || | || || Sbjct 77644 GAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTC 77703 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| | || || || ||||| || | || ||||||| | || |||||||| || Sbjct 77704 TTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCCGGAGGAATGCCTTCCTTGTC 77763 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTC---TCTACTTCAAGAGTAAT 152068 ||| || || ||||| | || | | |||| |||| || || || || || || Sbjct 77764 TTGGATCTTGCTCTTGACGTTGTCGATGGTGTC---ACTCGATTCAACCTCGAGCGTGAT 77820 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||| ||||| | |||||| Sbjct 77821 CGTCTTGCCGGTAAGCGTCTTAACGAATATCTGCAT 77856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153816985901118