Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq185 125 5e-24 seq101 96.9 2e-15 >seq185 Length=319224 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | |||||||| ||||| ||| || ||||||||||| || |||||||| || | Sbjct 77402 CCTCCACGCAGTCTCAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGAC 77461 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 ||| || |||| |||| ||| || ||||||||||||| ||||| || || | || Sbjct 77462 AGTGTTCGTCCGTCCTCCAACTGTTTGCCGGCAAAGATCAGTCGCTGTTGGTCGGGCGGA 77521 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||| ||||| || ||||| ||| | | | || ||||| | | |||||| Sbjct 77522 ATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCTGAGCTTTCCACT 77581 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| ||||||||||| || || || ||||| || || || ||||| Sbjct 77582 TCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 77628 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| ||||||||||| |||| ||| || |||| |||| ||||| || |||||| Sbjct 77666 TCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAG 77725 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||| ||| || || || | ||| | |||||||| || ||||| ||| | | Sbjct 77726 ATCAGACGTTGTTGGTCCGGAGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTGACGTTG 77785 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | |||||||| ||||| ||||| | ||| |||||||| || || || ||||| ||| Sbjct 77786 TCGATGGTGTCACTCGATTCAACCTCGAGCGTGATCGTCTTGCCGGTAAGCGTCTTAACG 77845 Query 44327 AAGATTTGCATG 44338 || || |||||| Sbjct 77846 AATATCTGCATG 77857 >seq101 Length=409543 Score = 96.9 bits (106), Expect = 2e-15 Identities = 133/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||| ||||| ||| || ||| | || || || ||||| ||||| |||| Sbjct 84945 CCTTCTGGATATTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 84886 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 |||| |||||||| || | || | |||||||| || ||||| ||| || ||| Sbjct 84885 TCAATCGCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGAATCTTGGACTTGACATTGT 84826 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||||| || || ||||| | || || ||||| |||||||||||||| || Sbjct 84825 --CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 84768 Query 44326 GAAG 44329 |||| Sbjct 84767 GAAG 84764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989268055186