Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq185 138 3e-27 seq101 120 7e-22 seq42 93.3 1e-13 >seq185 Length=319224 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || |||||||| |||||||| ||| ||| Sbjct 77853 CAGATATTCGTTAAGACGCTTACCGGCAAGACGATCACGCTCGAGGTTGAATCGAGTGAC 77794 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| || ||||| ||||| || ||||||||||| ||| Sbjct 77793 ACCATCGACAACGTCAAGAGCAAGATCCAAGACAAGGAAGGCATTCCTCCGGACCAACAA 77734 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || || | ||||| || | || || |||| || ||| || Sbjct 77733 CGTCTGATCTTTGCTGGCAAGCAATTGGAAGACGGCCGTACCCTCTCCGACTACAACATC 77674 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || |||||||| || ||||| || Sbjct 77673 CAGAAGGAATCAACCCTCCATCTCGT 77648 Score = 127 bits (140), Expect = 5e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || ||||| || || || ||||||||||||||| Sbjct 77625 CAGATATTTGTCAAGACACTTACTGGCAAGACGATTACACTGGAAGTGGAAAGCTCAGAC 77566 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| ||||| || || || || || ||||| || Sbjct 77565 ACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCGCCCGACCAACAG 77506 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||| ||||| |||||| | || || ||| | || || | || || ||| | Sbjct 77505 CGACTGATCTTTGCCGGCAAACAGTTGGAGGACGGACGAACACTGTCGGACTACAACATT 77446 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || || ||||| | || ||||||| Sbjct 77445 CAGAAGGAGAGCACCCTGCACTTGGTGCTGAGACT 77411 Score = 127 bits (140), Expect = 5e-24 Identities = 154/206 (75%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || ||||| || ||||| || | ||| Sbjct 78081 CAGATCTTCGTCAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGCGAC 78022 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| |||||||||||||| ||||| || || ||||| || || Sbjct 78021 ACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGCATTCCCCCGGATCAACAG 77962 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || || || |||||||| ||||| || |||||||| | || |||| ||| |||||| | Sbjct 77961 CGTCTCATTTTCGCCGGCAAACAACTTGAAGATGGCCGTAC-CTTGAGCGACTATAACAT 77903 Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128 ||| || ||||| || || || |||| Sbjct 77902 CCAGAAGGAATCTACCCTTCA-CTTG 77878 >seq101 Length=409543 Score = 120 bits (132), Expect = 7e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || ||||| || || || |||||||||||||| || || ||||| ||| Sbjct 84765 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 84824 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| |||||||| ||||| ||||| ||||| || |||||||| ||| | Sbjct 84825 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGCATCCCACCTGACCAGCAGCGATTG 84884 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 ||||||||||| || || || || ||||| Sbjct 84885 ATCTTCGCCGGCAAGCAACTTGAGGATGG 84913 >seq42 Length=56582 Score = 93.3 bits (102), Expect = 1e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| ||||| || || || ||||||||||| || ||||||||||| || || |||||| Sbjct 29252 GACAAGGAAGGGATTCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 29311 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || || | ||||| |||| || ||| |||| || ||||| || || || || || Sbjct 29312 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCCACCCTCCACCTGGT 29367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203727220916052