Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq185 140 3e-28 seq42 120 3e-22 seq101 89.7 5e-13 >seq185 Length=319224 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | || ||||| || || |||||||| ||||| ||||||||| Sbjct 77630 CCTCCGCGAAGCCGGAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAG 77689 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| || | |||||||| || || ||||| || |||||||||| ||| Sbjct 77690 AGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCCGGAGGA 77749 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||| ||| || ||| ||| | | | ||||| ||||| || || Sbjct 77750 ATGCCTTCCTTGTCTTGGATCTTGCTCTT-GACGTTGTCGATGGTGTCACTCGATTCAAC 77808 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | ||| ||||| || || || |||||||| ||||| ||||||||| Sbjct 77809 CTCGAGCGTGATCGTCTTGCCGGTAAGCGTCTTAACGAATATCTGCATG 77857 Score = 131 bits (144), Expect = 2e-25 Identities = 171/232 (74%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | |||| || || || |||||||| |||||||||||| Sbjct 77857 GCCTCCGCGGAGACGAAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCGCT 77916 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| || | || || || || ||||||||||| || || |||||||| |||| ||| Sbjct 77917 CAAGGTACGGCCATCTTCAAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGATCCGGGGG 77976 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTC 41811 || || ||||||||| ||| | || | ||| || | || | |||||||| ||||| Sbjct 77977 AATGCCTTCCTTGTCC-TGAATCTTGGACTTGACATTGTCG--ATGGTGTCGCTGGACTC 78033 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| | ||| || || || || || || ||||| ||||| ||||||||| Sbjct 78034 GACCTCAAGCGTGATGGTCTTGCCAGTAAGTGTCTTGACGAAGATCTGCATG 78085 Score = 118 bits (130), Expect = 1e-21 Identities = 157/214 (73%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| ||||| |||||||||||||||||||| ||||| || || || || |||| || Sbjct 77419 CACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGACAGTGTTCGTCCGTCCTC 77478 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 | ||| |||||||| || ||||| ||||||||||| | |||| | |||||||| | | Sbjct 77479 CAACTGTTTGCCGGCAAAGATCAGTCGCTGTTGGTCGGGCGGAATACCCTCCTTGT-CTT 77537 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCG 41828 || | || | | ||| | | | ||||| ||| ||||| |||| || |||| Sbjct 77538 GAATCTTGGACTTGACGTTGTCGATCGTGTCTGAGCT---TTCCACTTCCAGTGTAATCG 77594 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || || || ||||| || || |||||||| Sbjct 77595 TCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 77628 >seq42 Length=56582 Score = 120 bits (132), Expect = 3e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || ||||| | ||||| || || ||| |||||||| ||||| ||||||| Sbjct 29387 CGCCACCACGAAGACGGAGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGG 29328 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 |||| ||||| |||| ||||| |||||||||||||| |||||||| || ||||| | || Sbjct 29327 AGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGG 29268 Query 41754 GAACGCTCTCCTTGTC 41769 ||| | |||||||| Sbjct 29267 GAATCCCTTCCTTGTC 29252 >seq101 Length=409543 Score = 89.7 bits (98), Expect = 5e-13 Identities = 133/184 (72%), Gaps = 6/184 (3%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| || || |||||| |||||||| | || || || |||||||||||||| | Sbjct 84945 CCTTCTGGATATTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 84886 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACG 41789 ||| ||||| ||||| | || | || ||||||| | ||| | || | ||| || | Sbjct 84885 TCAATCGCTGCTGGTCAGGTGGGATGCCTTCCTTGT-CTTGAATCTTGGACTTGACATTG 84827 Query 41790 ACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 || | |||||| |||||| ||||| | || || || || ||||| || ||||| | Sbjct 84826 TCG--ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 84769 Query 41850 CGAA 41853 |||| Sbjct 84768 CGAA 84765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302509069600