Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1 109 1e-18 >seq1 Length=1009051 Score = 109 bits (120), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 7/227 (3%) Strand=Plus/Minus Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473 ||||||| || ||| ||| | || ||| ||| | ||||||||| | | || ||| Sbjct 159018 AGGAGTTTCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGA 158959 Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTT-------GGTTACGAG 230526 ||||||||||||||||| || || || | | ||||| || || ||||| Sbjct 158958 AGCAGTACATCGAATTCGTCGCTGATCGTCTCCTCGTTGCTCTCANNTCTCGGCAACGAG 158899 Query 230527 AAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAG 230586 || |||||||| || | ||||| || | || |||||| ||| || ||| || ||| Sbjct 158898 AAGGTGTACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAG 158839 Query 230587 ACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 |||||||||||||| ||||| || |||||| |||| | | ||||| Sbjct 158838 ACCAACTTCTTCGAGAAGCGCGTTGCTGACTACCAGAAGGCCGGTGT 158792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057819215660390