Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1 111 2e-19 >seq1 Length=1009051 Score = 111 bits (122), Expect = 2e-19 Identities = 202/295 (68%), Gaps = 3/295 (1%) Strand=Plus/Plus Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 |||| | || || ||||||||||| || ||| |||||||||| ||||||||||| Sbjct 159361 GGTCCTTGATGTAGGTATCGATGAGGAGAGAGTATGTTTCGGAGTGGATGTTCTCCATCA 159420 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTT 17345 ||||| || || || |||||||| || || | || || || || || |||||| | Sbjct 159421 TGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGATCTGGACCTCGCCGCTGAATCGCT 159480 Query 17346 CCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAA 17405 | | ||||| || || |||||||||||| || ||||| || || | || || | Sbjct 159481 CAACAAGATTCTCATTGACGATGCCGTCGGAGGCAGCGAAGAAAGCAAGAATGTGGGAGA 159540 Query 17406 TGAAATATTTTTCGTCCGGTGTAA---GAACGCGCCAGTCCTTTAAATCTTTGGATATAT 17462 |||| |||| ||||| | || | | | |||||| | | ||| ||||| | || Sbjct 159541 TGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCCAGTCGTGGAGATCCTTGGAGAGAT 159600 Query 17463 CCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 | | || || | ||||| || ||| ||||||| || ||||| | ||| || Sbjct 159601 CGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCCTTCTTGTACATTTGCCAGAT 159655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543316330040