Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1 145 1e-29 seq9 141 1e-28 >seq1 Length=1009051 Score = 145 bits (160), Expect = 1e-29 Identities = 370/559 (66%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123 ||| || || ||| ||| ||||||||||| | | ||| | ||||| ||||| | || Sbjct 159098 ACAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAG 159157 Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183 || ||||| ||||||||||| || ||||| || || || ||||| | || ||||| Sbjct 159158 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 159217 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATG 42240 ||| || || || || ||||| |||| ||| | || || | | | | || || Sbjct 159218 GATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAGTTCTTATCCTG 159277 Query 42241 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 42299 ||||| | || |||||||| ||||||||| | ||||| || || || | ||| | Sbjct 159278 GATCCATCGGATG-GCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGT 159336 Query 42300 TAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACA 42359 | ||||| || | | | || || | || |||||||| | ||| || Sbjct 159337 TGAAGAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGAGAGTATG 159396 Query 42360 TTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAA 42419 |||| || || ||||| || || ||||| || || ||||| |||| ||||||| | Sbjct 159397 TTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGA 159456 Query 42420 CCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTG 42479 ||| || || | ||||| ||| | | ||| || || || || ||||| ||| | Sbjct 159457 TCTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGCAG 159516 Query 42480 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT---TTATTCC 42536 | || || || | | || || || |||| ||||| | || ||| || |||| Sbjct 159517 CGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCC 159576 Query 42537 AATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCT 42596 | || | || ||| || || | ||| | || || | ||||| || || || ||||||| Sbjct 159577 AGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCCT 159636 Query 42597 TTTTATACATATTCCAGAT 42615 | || ||||| | |||||| Sbjct 159637 TCTTGTACATTTGCCAGAT 159655 >seq9 Length=510024 Score = 141 bits (156), Expect = 1e-28 Identities = 452/696 (65%), Gaps = 4/696 (1%) Strand=Plus/Minus Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033 ||||| ||||| || || ||||| | | ||| || || | | || || ||||| Sbjct 507421 CCAGGGCATTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATG 507362 Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093 || |||||||| ||||||||||||| || || || | | | |||||| || || Sbjct 507361 AAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCG 507302 Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153 |||||| ||||| |||||| | | | || | ||||| || || | ||| ||| Sbjct 507301 TGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATG 507242 Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213 || | | || || || ||||| || ||||| || | ||| | ||| ||||| || | Sbjct 507241 GCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAAC 507182 Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273 || | || ||| |||| ||||| ||||| | |||||| || |||| ||| || ||| Sbjct 507181 ACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTAGTACCGGCGATGTAAGAGCCA 507122 Query 72274 CTGGCACGAATATTGCTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 72332 ||||||| || | | | | | | || || || || ||||| || || || | || Sbjct 507121 GTGGCACGGAT-TCGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGC 507063 Query 72333 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 72392 || ||| | ||||| ||||| || || || || || ||| |||| | || || || Sbjct 507062 ACAAGTTTTGAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAA 507003 Query 72393 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 72452 || || | || | | ||| || || || ||||| || || || || || Sbjct 507002 GCATGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGT 506943 Query 72453 AAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGAT 72511 || | || |||| || ||||| ||||| | | || ||||| || Sbjct 506942 GAAGAACTTGCTTGACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCA 506883 Query 72512 GTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTA 72571 | ||||| || ||||| ||||| | ||||||||| || | ||| | || ||| | | Sbjct 506882 G-ATTCCAACAGCGACTCGCATGATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAA 506824 Query 72572 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 72631 | | | |||||| ||| | ||| ||| || |||||||||||||| ||||| | Sbjct 506823 TCTGTAGCAAGTATGATCTGGACAAGGTTCGGAAGCCAAAATAGTTGTAGTTGAAGTCGC 506764 Query 72632 GTTCGTAAATAATAACCGAATTGAGTTTATCCTTAT 72667 | || || | ||| | || | ||||| || |||| Sbjct 506763 GATCATAGACAATCGCTGAGTCGAGTTCCTCTTTAT 506728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671136238598280