Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 266 5e-66 seq9 118 2e-21 >seq1 Length=1009051 Score = 266 bits (294), Expect = 5e-66 Identities = 574/849 (68%), Gaps = 26/849 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||||||||| ||||| | || ||| ||||||| Sbjct 159655 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 159596 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | || |||||| | |||| | | || || || Sbjct 159595 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 159536 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 |||||| | || ||||| || | |||||| || |||||||| || ||||| ||||| || Sbjct 159535 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAG-CG 159477 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256 |||| ||| | || || |||| ||| ||||| || || ||||| ||||||| Sbjct 159476 ATTCAGCGGCGAGGTCCAGATCCCCGAGGC-TCGATGCTTCTATGGTTTCCAGATCATGA 159418 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG- 125315 | |||||| | ||||| |||| |||||| || || || | ||||| || || Sbjct 159417 TGGAGAACATCCACTCCGAAACATACTCTCTCCTCATCGATACCTACATCAAGGACCCTG 159358 Query 125316 --CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 || |||| | || ||||| ||||| | ||||| | || | || || || |||| Sbjct 159357 CCCAGCGTACATAC---CTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGAAGG 159301 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433 | | |||| || || |||||| | || | || ||| | | || | | || || | Sbjct 159300 CGGATTGGGCCATCCGATGGATCCAGGATAAGAACTCTACCTTTGCTCAGCGTCTTGTTG 159241 Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493 | || || ||||| ||||| |||||||| ||| ||||| ||||||| ||||||| Sbjct 159240 CTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCA 159181 Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 ||||||| || |||||||| || |||| ||||||| | || ||||| || |||| Sbjct 159180 AGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAGG 159121 Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGAT 125613 | || ||| ||||||||| ||| || | ||| | | | | || | | Sbjct 159120 GTCTTCACACCGACTTTGCCTGTCTCCT------CCACTCT---CACCTCAAGGGACGTG 159070 Query 125614 CCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673 ||||| | | | | || ||||| | ||||||||||| || || || ||||||| Sbjct 159069 CCAGCAAACAGATGATCCAGGACATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTC 159010 Query 125674 TAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACA 125733 | || || | || || | || | |||||||||| ||| || ||| |||||| Sbjct 159009 TTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACA 158950 Query 125734 TAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGA----TTGGC--CG-CAAGATTTAC 125786 | || || || || |||||||| || | | | | ||| || ||| | ||| Sbjct 158949 TCGAATTCGTCGCTGATCGTCTCCTCGTTGCTCTCANNTCTCGGCAACGAGAAGGTGTAC 158890 Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846 || ||| || || || || |||||| | ||| || || | || ||||||||||| Sbjct 158889 AAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTC 158830 Query 125847 TTCGAGAAG 125855 ||||||||| Sbjct 158829 TTCGAGAAG 158821 >seq9 Length=510024 Score = 118 bits (130), Expect = 2e-21 Identities = 322/488 (66%), Gaps = 10/488 (2%) Strand=Plus/Plus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 || |||||| ||||| || || || || || || || | ||| ||||| | || || Sbjct 507198 CGTTACGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAGCCA 507257 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| ||||| || || || | || | || || ||| || || |||| Sbjct 507258 TGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTC 507317 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC 97043 || || | ||| |||| | || || ||| | || ||| | ||||||||||| ||| | Sbjct 507318 CGCGCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAG 507377 Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103 ||| | |||| || |||||||| || | || || || | || |||| Sbjct 507378 AGAAACGGCGAATGGACTCTCATGTGCCCTAACGAATGCCCTGGCCTTGCTGACTGCTAC 507437 Query 97104 GGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGA 97163 || || || |||||||| |||| |||||| |||||| || | | | | Sbjct 507438 GGTGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGG----TAAGGGTCGCAA 507493 Query 97164 GTCGATGCACG---AGAA-CTGTGGAAGGCCAT-CGTGACGGCTCAGGTAGAGACTGGAA 97218 ||| || | | |||| || ||| | ||||| | ||| ||| ||| |||||| |||| Sbjct 507494 GTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGA-GGCCCAGACAGAGACCGGAA 507552 Query 97219 CTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCA 97278 || | ||| |||||||||||| | |||||||| ||||||||| || | || | Sbjct 507553 ACCCTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGCAACCAAAAGAACCTTGGTA 507612 Query 97279 CCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGG 97338 ||||| ||||||| |||||||| || || | || ||| | | || || ||| | Sbjct 507613 CCATCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCG 507672 Query 97339 CAGTTTGC 97346 | |||||| Sbjct 507673 CTGTTTGC 507680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055930076280