Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1 172 7e-38 seq9 149 8e-31 >seq1 Length=1009051 Score = 172 bits (190), Expect = 7e-38 Identities = 376/559 (67%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| || || ||| ||| |||||||| || | | ||| || ||||| ||||| | || Sbjct 159098 ACAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAG 159157 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 || ||||| ||||||||||| || ||||| || |||||||| || | || ||||| Sbjct 159158 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 159217 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATG 33479 ||| || || || |||||||| |||| ||| | || || | | | | || || Sbjct 159218 GATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAGTTCTTATCCTG 159277 Query 33480 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 33538 ||||| | || |||||||| ||||||||| | ||||| || || || | ||| | Sbjct 159278 GATCCATCGGATG-GCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGT 159336 Query 33539 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 33598 | ||||| || | | | || || | || |||||||| | ||| || Sbjct 159337 TGAAGAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGAGAGTATG 159396 Query 33599 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33658 |||| || || ||||| || || ||||| || || ||||| |||| |||||||| | Sbjct 159397 TTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGA 159456 Query 33659 TCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTG 33718 |||| || || | ||||| || | | ||| ||||| || || ||||| ||| | Sbjct 159457 TCTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGCAG 159516 Query 33719 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGT---TAGTTTATTCC 33775 | || || || | | || || || |||| ||||||| || | | || |||| Sbjct 159517 CGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCC 159576 Query 33776 AATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33835 | || | || ||| || || | ||| | || || ||||||| || || |||||||||| Sbjct 159577 AGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCCT 159636 Query 33836 TTTTATACATGTTCCAGAT 33854 | || ||||| | |||||| Sbjct 159637 TCTTGTACATTTGCCAGAT 159655 >seq9 Length=510024 Score = 149 bits (164), Expect = 8e-31 Identities = 626/973 (64%), Gaps = 18/973 (2%) Strand=Plus/Minus Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCA 62956 || || || || ||||| || ||||||| || | ||| |||| || ||||||||||| Sbjct 507691 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGC-GCAGTATTCAATGATCTCAGTGCA 507633 Query 62957 AAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 63016 || || | ||| || || | || | ||| || ||||| || || ||| Sbjct 507632 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGATTGCAGTGATC 507573 Query 63017 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 63076 ||| || || ||||| || | || || || |||| | || | ||| || | ||| | Sbjct 507572 CTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAA- 507514 Query 63077 GACTC-GAGCCTTTATTATAGATTTGTATCTCCTT----TCTCTTTCGTATAGTGTATAC 63131 | || ||||||| || ||| ||| | |||| ||||| ||||| | ||| Sbjct 507513 GCTTCTGAGCCTTGAT---AGACTTGCGAC-CCTTACCCTCTCTCTCGTACTTTTCGTAC 507458 Query 63132 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACACAT 63190 | || || ||||| || | || | ||| ||||| ||||| | || ||||| Sbjct 507457 AGAGCCTCAAATTCGTCACCGTAG-CAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACAT 507399 Query 63191 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63250 | | ||| || |||| || || || ||||| || |||||||| ||||||||||| Sbjct 507398 GAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGC 507339 Query 63251 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310 || || || || | | | ||||| || || |||||| ||||| ||||| Sbjct 507338 TAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 507279 Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370 | | | | || | ||||| || || | ||| ||||| | | ||||| || ||||| Sbjct 507278 CTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTT 507219 Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 || ||||| || | ||| | ||| ||||| || | || | || ||| |||| ||||| Sbjct 507218 ACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACC 507159 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490 ||| || ||||||| ||||||| ||| || ||| ||||||| || | | | Sbjct 507158 GTTGGAAGTACCATTAGTACCGGCGATGTAAGAGCCAGTGGCACGGAT-TCGGTGGGCGT 507100 Query 63491 T-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGA 63549 | | || || || || ||||| || || || | || || ||| | || || |||| Sbjct 507099 TCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTTTTGAGGGTATCGTAGA 507040 Query 63550 TACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 63609 |||| || ||||| || || |||| | || || || || || | || | | Sbjct 507039 TACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTG 506980 Query 63610 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGAT 63669 ||| || || || ||||| || || || || || || | || || | || | Sbjct 506979 GAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGT 506920 Query 63670 TGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATT 63728 |||| ||||| | | || ||||| || | ||||| || ||||| ||||| Sbjct 506919 TGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAG-ATTCCAACAGCGACTCGCATG 506861 Query 63729 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63788 | ||| ||||| || | ||| | || ||| || || | | |||||| ||| | | Sbjct 506860 ATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCTGTAGCAAGTATGATCTGGAC 506801 Query 63789 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 63848 || ||| || |||||||||||||| ||||| || || || | ||| | |||| | Sbjct 506800 AAGGTTCGGAAGCCAAAATAGTTGTAGTTGAAGTCGCGATCATAGACAATCGCTGAGTCG 506741 Query 63849 AGTTTATCCTTAT 63861 |||| || |||| Sbjct 506740 AGTTCCTCTTTAT 506728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622944451245480