Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq9 370 3e-97 seq1 104 6e-17 >seq9 Length=510024 Score = 370 bits (410), Expect = 3e-97 Identities = 1141/1738 (66%), Gaps = 40/1738 (2%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 |||| ||| ||||||||||||||| | ||||| || ||| |||| ||| | ||| Sbjct 506835 ATTGCTGAGCGCCCGCAGCATATGATCATGCGAGTCGCTGTTGGAATCTGGGGTGACGAT 506894 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGCACGCCA 363559 |||| | | || ||||| || || | | | || || | ||||| || || | Sbjct 506895 ATTGAGCGTGTCTTGGAGACATACAACCTCATGTCAA-GCAAGT-TCTTCACTCATGCAA 506952 Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619 || || | | ||| || || |||| | || ||| | || || ||||| ||| | Sbjct 506953 GCCCCACTTTATTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTG 507012 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 | |||||||| || ||| || ||||||| || || || || | |||||| | |||| Sbjct 507013 ATATGAAGGAGGACAGCATTGATGGTATCTACGATACCCTCAAAACTTGTGCCATGATTT 507072 Query 363680 CCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTA 363737 |||||| || || || ||||| | | || |||| | ||||| || | | ||| Sbjct 507073 CCAAGATGGCTGGTGGTATTGGCTTGAACGC-CCACCGAATCCGTGCCACTGG-CTCTTA 507130 Query 363738 CATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 ||| ||| || || |||| | || || | ||||||||||| |||||||| ||| Sbjct 507131 CATCGCCGGTACTAATGG-TACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACA 507189 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856 | ||||| | ||||| ||||||||||| ||||| || || || || || || | Sbjct 507190 ACACTGCTCGTTACGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACC 507249 Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAG 363916 | ||||| || ||||| | || ||||| ||||| ||||| || ||| || || | Sbjct 507250 TTGAGCCATGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGG 507309 Query 363917 AGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGC 363976 |||| | || || ||||| ||||||| || |||||| | |||| | ||| ||||||| Sbjct 507310 AGGAGGTCCGCGCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGC 507369 Query 363977 GCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC 364035 | || ||| | | |||| || | ||| | ||||| ||||||| || || ||| | Sbjct 507370 GTGTCGAGAGAAACGGCGAAT-GGACTCTCATGTGCCCTAACGAATGCCCTGGCCTTGCT 507428 Query 364036 GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT 364095 || | |||||||| | || ||||| ||||||||||| || ||||| |||| | Sbjct 507429 GACTGCTACGGTGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGTAAGGGT 507488 Query 364096 CGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACA 364155 || ||| | || || |||||||| |||| ||||| | || | |||| ||||| Sbjct 507489 CGCAAGTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACAGAGACC 507548 Query 364156 GGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCT 364214 |||| ||||| | ||| | ||||| ||| ||||| |||||| |||||| || |||| Sbjct 507549 GGAA-ACCCTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGCAACCAAAAGAACCT 507607 Query 364215 TGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACG 364273 |||||| | || | || |||||| || || ||||| ||||||||| ||| || || | Sbjct 507608 TGGTACCA-TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGATG 507666 Query 364274 AGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA------AAGATG 364327 || || || || |||||||| || | | || || | || | | |||||| Sbjct 507667 AGGTCGCTGTTTGCAACCTTGCCTCCTTGTCTCTGCCTTCTTTCATCAACTATGAAGATG 507726 Query 364328 GTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACA 364387 | | ||| | || | || | || || || | || | ||||| | ||| Sbjct 507727 CTTGCTACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTTGTTGTCCGCAATTTGAACA 507786 Query 364388 AGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCG 364442 || | |||||| || | || || | | || || || ||| || ||||| Sbjct 507787 AGATCATCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGC-----AACATGCG 507841 Query 364443 TCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGAT 364502 ||| || || |||||||||||||| || || || ||||| | || | ||| || Sbjct 507842 TCACCGACCCATTGGTCTTGGTGTGCAAGGTCTTGCTGATGCCTTCCTTGCCCTCCGCAT 507901 Query 364503 GGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTT 364562 | | ||||| || ||||| ||||||| || || ||| | ||||| || || || || Sbjct 507902 GCCCTTTGAGTCTCCTGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACCA 507961 Query 364563 TGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATG 364621 || || | ||| | || |||| | | || || | || ||||| || | Sbjct 507962 CGCTGCCCTTACTACATC-TGTGCAACTCGCTAAGGAGGAAGGTCCCTACTCCACCTTCA 508020 Query 364622 AGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTG 364681 | || |||||| || |||| | ||||||| || | |||||||||| ||| |||| Sbjct 508021 AAGGCTCCCCTGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAATGTCAAGCCCTCTG 508080 Query 364682 TCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC 364739 || ||| ||||||| | || || | || |||| || |||| |||||| || Sbjct 508081 ACCTTTGGGACTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTC 508140 Query 364740 -CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGT 364798 |||||| || || ||||| || || ||| | ||||| || || |||||||| | Sbjct 508141 TGCTCGTT---GCTCCTATGCCTACCGCCAGTACCTCGCAGATTCTTGGCAACAACGAAT 508197 Query 364799 GCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGG 364858 |||| || || | || ||| | || |||||| || ||| | || || || | || Sbjct 508198 GCTTTGAGCCTTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAGG 508257 Query 364859 TAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGA 364918 | || || | || ||||||||||| |||| || || ||| || |||| Sbjct 508258 TTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTATGA 508317 Query 364919 AGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATC 364978 ||||| ||||| || | ||| |||||| | |||||||| || | || | || Sbjct 508318 AGAACCGCATCATTGCTGATAACGGTTCTATCCAGAACATCCCCAACATCCCTGCCGAGA 508377 Query 364979 TGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGG 365038 | ||| || | ||||| || || ||||| ||||| |||| | | | ||||| | Sbjct 508378 TCAAGGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGGCTG 508437 Query 365039 CCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAA 365098 | || || ||||| || || |||| ||||| | ||| | ||||| | || | Sbjct 508438 CTGACCGTGGTGCCTTCATTGATCAGTCTCAGTCTCTCAACATTCACATGAAGGACCCTA 508497 Query 365099 CCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 || | |||| | || |||||| ||| || ||||| |||||| ||||| || Sbjct 508498 CCATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAGACTGG 508555 >seq1 Length=1009051 Score = 104 bits (114), Expect = 6e-17 Identities = 311/468 (66%), Gaps = 23/468 (5%) Strand=Plus/Minus Query 22190 ACGAACAACATTTTATCAAATATATTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTT 22249 |||| ||| | || ||| | ||||| || ||||| ||| || | ||||| || || Sbjct 159555 ACGAGCAATACTTCATCTCCCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCA 159496 Query 22250 TTGAGAATCTAGT-GACTAATTTTGCATCTGAAATTCAATACCCAGAGGCCAGATGTTTC 22308 ||||||||| || || ||| || | || | || ||| ||||| |||| ||| Sbjct 159495 ATGAGAATCTTGTTGAGCGATTCAGCGGC-GAGGTCCAGATCCCCGAGGCTCGATGCTTC 159437 Query 22309 TATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACATATTCTATGATGCTACAG 22368 |||||| | || || ||||| || || | ||| | |||||||| ||| || | Sbjct 159436 TATGGTTTCCAGATCATGATGGAGAACATCCACTCCGAAACATACTCT------CTCC-- 159385 Query 22369 TCACTCG-TAGA-AGATAAAG-AC---GAACAACGAA---ACTTATTCCGCGCGATTCGC 22419 ||| ||| || | || ||| || | || || | || | ||| ||| || | Sbjct 159384 TCA-TCGATACCTACATCAAGGACCCTGCCCAGCGTACATACCTCTTCAACGCCGTTGAC 159326 Query 22420 ACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAAT--GAAC 22477 || |||| | || || ||||| |||||||| | |||||| | || |||| Sbjct 159325 ACTATTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAGGATAAGAAC 159266 Query 22478 GTT-CATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGA 22536 | | || || | |||||| |||| ||||||| ||||| || || ||||| || Sbjct 159265 TCTACCTTTGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGT 159206 Query 22537 GCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCA 22596 || ||| | | ||||| ||||| || || |||| | ||||| ||||| | ||||| Sbjct 159205 GCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCT 159146 Query 22597 AATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644 || ||| | ||| || |||||||||||||| ||||| ||||| ||| Sbjct 159145 AACGAGCTCATTTCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGT 159098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303347705176046