Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq328 116 9e-21 seq219 105 2e-17 seq1 104 6e-17 >seq328 Length=334975 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | || || || ||||| || ||||||| | Sbjct 367 CCACCACGAAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 426 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || ||||| |||| ||||| ||| | ||| Sbjct 427 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGG 486 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | ||||| || || || | ||| || || || Sbjct 487 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGATGACTCAACC 546 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| ||||||| ||||||||||| |||||||| Sbjct 547 TCGAGGGTAATAGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 593 >seq219 Length=322996 Score = 105 bits (116), Expect = 2e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || | |||| ||| || || ||||| || |||||| Sbjct 33529 CCACCACGAAGGCGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 33588 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || ||||| || ||||| || ||| Sbjct 33589 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGG 33648 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | ||| || || || Sbjct 33649 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 33708 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || |||||||||||||| || || ||||||||||| |||||||| ||| Sbjct 33709 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATGATG 33759 >seq1 Length=1009051 Score = 104 bits (114), Expect = 6e-17 Identities = 143/201 (71%), Gaps = 7/201 (3%) Strand=Plus/Minus Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAAT 269178 ||||| || ||| ||| |||| ||| | || |||| ||||| || | |||||||| Sbjct 159016 GAGTTTCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAG 158957 Query 269179 CAATATATCGAATTCGTGGCTGATCGTATCTTCACGGC-------ACTCGGTTATGAGAA 269231 || || ||||||||||| ||||||||| || || || ||||| | ||||| Sbjct 158956 CAGTACATCGAATTCGTCGCTGATCGTCTCCTCGTTGCTCTCANNTCTCGGCAACGAGAA 158897 Query 269232 AGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGAC 269291 |||||||| || | || || |||| ||| ||||| || || || | || ||||| Sbjct 158896 GGTGTACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGAC 158837 Query 269292 GAACTTCTTCGAAAAGCGTGT 269312 ||||||||||| ||||| || Sbjct 158836 CAACTTCTTCGAGAAGCGCGT 158816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179649064644334