Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq11 91.5 3e-13 seq1 87.8 4e-12 >seq11 Length=829177 Score = 91.5 bits (100), Expect = 3e-13 Identities = 170/250 (68%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 334105 AGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTT 334164 |||||||| | | ||| | || ||| | ||| | ||||| || ||| | |||| | Sbjct 589551 AGTCAATGGTGGTCATCTCAGTATCAGCGGAGTCCAAGTCGTGCTCGACGAAGACAGTCT 589492 Query 334165 TCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAG 334224 | | | ||| |||||| || || | ||| |||| || |||||||| || | Sbjct 589491 TGACCTCGTCCTGCTTGGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATGAGGG 589432 Query 334225 TTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGA 334284 | || || || | ||||| || ||||| |||||||| || | |||||||| ||| || Sbjct 589431 TGGACTTTCCGGAACCGTTGGGACCACAAAGACCGTAACGCTGACCACGCTTGAGACGGA 589372 Query 334285 ACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACA 334344 | || | ||| |||||||| || |||| || || ||||| || ||| | || | Sbjct 589371 GGTGAGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAAA 589312 Query 334345 GATCCTCACC 334354 |||||||||| Sbjct 589311 GATCCTCACC 589302 >seq1 Length=1009051 Score = 87.8 bits (96), Expect = 4e-12 Identities = 118/165 (72%), Gaps = 7/165 (4%) Strand=Plus/Minus Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 ||||||||||| | |||||| ||||||||||||||||| || || || | || | Sbjct 158980 GGCATGAACTCCAACCTCATGAAGCAGTACATCGAATTCGTCGCTGATCGTCTCCTCGTT 158921 Query 243628 GCGCTT-------GGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 || || || | ||||| |||||||| |||| ||||| || | ||| ||||| Sbjct 158920 GCTCTCANNTCTCGGCAACGAGAAGGTGTACAAGTCCACCAACCCTTTCGACTTCATGGA 158861 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 | ||| || ||| || || || ||||||||||| ||||| || Sbjct 158860 GAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGCGT 158816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102875011880550