Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq9 176 4e-39 >seq9 Length=510024 Score = 176 bits (194), Expect = 4e-39 Identities = 393/583 (67%), Gaps = 8/583 (1%) Strand=Plus/Plus Query 94057 CGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATG 94116 ||||||| || || |||||| |||||| ||||| || |||||||| |||| || ||| Sbjct 507114 CGTGCCACTGGCTCTTACATCGCCGGTACTAATGGTACTTCCAACGGTATCGTTCCCATG 507173 Query 94117 CTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGT 94176 || || || ||||||||| | || || ||||| |||||||||||| | | | ||| Sbjct 507174 CTGCGTGTGTTCAACAACACTGCTCGTTACGTTGACCAGGGTGGTAACAAGCGACCTGGT 507233 Query 94177 TCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGA 94236 | ||||| |||| || ||||| |||||||| ||||| | ||| | || || ||| Sbjct 507234 GCCTTCGCCATCTACCTTGAGCCATGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGA 507293 Query 94237 AAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCA 94296 ||||||||||| || || || | || | ||||| |||| ||||| ||| | || Sbjct 507294 AAGAACCACGGTAAGGAGGAGGTCCGCGCTCGTGACCTGTTCTTAGCTCTTTGGATCCCT 507353 Query 94297 GACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAA 94356 || ||||| ||||| || ||||||| |||| || |||| ||| | || || || ||| Sbjct 507354 GATCTTTTCATGAAGCGTGTCGAGAGAAACGGCGAATGGACTCTCATGTGCCCTAACGAA 507413 Query 94357 TGTCCCGGACTGTCCGACGTTTGTGGATCGCG-TTTTGAAGACTTGTATGCTCGTTACGA 94415 || || || || | ||| | || | || ||||| | |||| | ||||| Sbjct 507414 TGCCCTGGCCTTGCTGACTGCTACGG-TGACGAATTTGAGGCTCTGTACGAAAAGTACGA 507472 Query 94416 ATCGCAGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGA 94475 |||| |||| | ||| ||| | ||| |||||| ||| | || | || Sbjct 507473 GAGAGAGGGTAAGGGTCGCAAGTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGA 507532 Query 94476 CGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGT 94534 | ||| ||||| || | || | ||| | | |||||| | ||| ||| |||| Sbjct 507533 GGCCCAGACAGAGACCGGAAACCCTTTCATGCTCTACAAGGATCACTG-CAATCGCAAGA 507591 Query 94535 CCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGT 94594 |||||| || |||| || ||| ||||| || |||||||| ||||| | || Sbjct 507592 GCAACCAAAAGAACCTTGGTACCATCCGAAGCTCCAACCTGTGCACTGAGATCATTGA-- 507649 Query 94595 ATACT--TCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCC 94635 ||||| | || || ||| | ||||| || ||||| | |||| Sbjct 507650 ATACTGCGCCCCTGATGAGGTCGCTGTTTGCAACCTTGCCTCC 507692 Score = 125 bits (138), Expect = 7e-24 Identities = 260/384 (68%), Gaps = 10/384 (3%) Strand=Plus/Plus Query 94994 AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAG 95053 |||| ||| | ||||||||| | ||| ||| |||||||| | || | ||||||||| Sbjct 508039 AGGGTATTCTCCAGTTCGACATGTGGAATGTCAAGCCCTCTGACCTTTGGGACTGGGAAC 508098 Query 95054 CTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGC 95113 | || || | ||||| | | |||||| | ||| ||||| || || || |||| Sbjct 508099 CCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTGCTCCTATGC 508158 Query 95114 CCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCA 95173 | || ||| || ||||||| |||||||||||||| | || || || | |||||||| Sbjct 508159 CTACCGCCAGTACCTCGCAGATTCTTGGCAACAACGAATGCTTTGAGCCTTACACCTCCA 508218 Query 95174 ACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCT-A 95232 || | ||| | | || || || || || || |||| || ||||| || || | Sbjct 508219 ACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAGGTTGTCAACCCCTGGCTTCTCA 508278 Query 95233 CGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACC----AACTGCTACG 95288 || | || || | ||||| | ||| || | ||||||| | |||| Sbjct 508279 AGGATCTTGTCGAC-ATGGGTCTTTGGTCCGATGCTATGAAGAACCGCATCATTGCT--- 508334 Query 95289 CGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAA 95348 | ||||| || ||||||||||||| | || || | || |||||||| || ||||| Sbjct 508335 -GATAACGGTTCTATCCAGAACATCCCCAACATCCCTGCCGAGATCAAGGCTCTGTACAA 508393 Query 95349 GACCGTGTGGGAGATCCCGCAGCG 95372 ||| ||||||||||| | ||||| Sbjct 508394 GACTGTGTGGGAGATTTCTCAGCG 508417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721017033880