Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 185 9e-42 seq219 116 4e-21 seq337 102 8e-17 seq328 100 3e-16 seq312 89.7 5e-13 >seq1 Length=1009051 Score = 185 bits (204), Expect = 9e-42 Identities = 378/553 (68%), Gaps = 13/553 (2%) Strand=Plus/Plus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 || ||||||||| || | ||||| || | |||||||| ||||| || ||| Sbjct 159099 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAGA 159158 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 || ||||||||||| || || |||||||| || |||| || || || |||||| Sbjct 159159 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAG 159218 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGC-TTCTT-TGCTGG 133072 | ||||| ||||| || ||||| || || |||| | || || | ||||| | |||| Sbjct 159219 ATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAGTTCTTATCCTGG 159278 Query 133073 CGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGT 133132 ||||| || | ||||| || ||||| | | || ||| || || || || | ||||| Sbjct 159279 --ATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGT 159336 Query 133133 TCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATA 133190 | || | | | | | || ||| | | |||||| ||||||||| || || Sbjct 159337 TGAAGAG--GTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGAGAGTA 159394 Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGAC 133250 |||| ||||| | ||||||||| ||| || || || || ||||| || |||||| Sbjct 159395 TGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGG 159454 Query 133251 CACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310 | ||| || || ||| ||||| || ||||| || ||||||||||||||| ||| Sbjct 159455 GATCTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGC 159514 Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGT-TGTCGTTCAAGCG---CT 133366 ||||| || || || | ||| |||||| | |||||| || | |||| || | Sbjct 159515 AGCGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAG-TCAATCGGTTGT 159573 Query 133367 CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGG 133426 ||||||| | |||||||| || || | |||||| | ||||| || || ||||| | Sbjct 159574 TCCAGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTG 159633 Query 133427 CTTTTTTGTACAT 133439 | || |||||||| Sbjct 159634 CCTTCTTGTACAT 159646 >seq219 Length=322996 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || || |||||| | || || ||| | || Sbjct 33755 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 33696 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||| ||||| || ||| | ||||| Sbjct 33695 GACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 33637 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || || || ||||| || || | |||||||| | ||||||||| Sbjct 33636 GCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAA 33577 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| | || || || ||||| || || Sbjct 33576 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTCCG 33541 >seq337 Length=1491250 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| |||| |||||| | | |||| | | Sbjct 838273 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCTTCGGACACCATC 838332 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || ||| | || || ||||| | Sbjct 838333 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGATTG 838392 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| ||||| || || | || |||||| ||||||||||||||| ||| Sbjct 838393 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAG 838452 Query 38433 G 38433 | Sbjct 838453 G 838453 >seq328 Length=334975 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || ||||| || || ||| |||| || ||| | || Sbjct 593 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACTATTACCCTCGAGGTTGAGTCATCC 534 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| || || | || || Sbjct 533 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAG 474 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | |||| ||| ||||| ||||| || || | ||||||||| |||||||||| Sbjct 473 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAAC 414 Query 38424 ATCCAAAAGGAAGCGACGCTGCA 38446 ||||| ||||| |||| || || Sbjct 413 ATCCAGAAGGAGTCGACTCTCCA 391 >seq312 Length=363204 Score = 89.7 bits (98), Expect = 5e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| ||||| || || | || || ||||| | |||| ||| ||||| Sbjct 363198 AAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGATTGATTTTCGCCGGCAAG 363139 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||||| || |||| || |||||| ||||||||||||||| |||||| | || || || Sbjct 363138 CAGCTCGAGGACGGTCGAACCCTCTCCGACTACAACATCCAGAAGGAATCAACCCTTCAC 363079 Query 38448 TTGGTGCTGCGT 38459 |||| || ||| Sbjct 363078 CTGGTCCTTCGT 363067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170592987520