Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq338 104 2e-16 seq31 96.9 3e-14 >seq338 Length=218439 Score = 104 bits (114), Expect = 2e-16 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 ||||| ||||||||| | |||| || |||||||| || ||||||||| | ||||||||| Sbjct 124018 GGTAAGGAAGGTCGTCTCCGAGGTAACTTGATGGGTAAGCGTGTCGATTTCTCTGCACGT 124077 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974 || || |||||| |||| |||| || | ||| |||| || ||||| |||| || || Sbjct 124078 ACCGTCATTACTGGTGATGCCAACCTTTCCCTCCATGAGGTCGGTGTGCCTCGTAGCATC 124137 Query 668975 GCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006 || || ||||||| | ||| | ||| || Sbjct 124138 GCCCGAACCCTTACTTATCCCGAGACTGTCAC 124169 >seq31 Length=487531 Score = 96.9 bits (106), Expect = 3e-14 Identities = 217/326 (67%), Gaps = 0/326 (0%) Strand=Plus/Plus Query 517979 TTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCA 518038 |||| |||| |||||| || | ||| | | || ||||| || || ||||||||| Sbjct 339170 TTATGCTTTCGCTTGAACTCGTTAACGAAGTGGTTAACGAGACGGTTGTCGAAATCTTCA 339229 Query 518039 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGAC 518098 || ||||| | ||| | || | |||| | || | ||| | || || |||| | Sbjct 339230 CCACCCAAGTGAGTGTCACCAGCAGTAGACTTGACCTCGAAGATACCCTCCTCAATGGTA 339289 Query 518099 AAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTG 518158 | |||| ||||| ||| |||||||| | ||| || || || || || || Sbjct 339290 AGGAGAGAGACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACGTTGCGCTCACCC 339349 Query 518159 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 518218 || || || |||||||| || |||| || ||||| || || || || || |||| Sbjct 339350 TCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCGTTGATGATTCGG 339409 Query 518219 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 518278 | ||| || ||||| || || || ||||| || || ||||| | || || ||||| Sbjct 339410 AGAACGTTGAGACCGGCGATGAGACCGGCATCCTTGGTAGCTTGACGCTGAGAGTCGTTG 339469 Query 518279 AAATATGCAGGAACAGTAATAACGGC 518304 || || ||||| ||||| | ||| || Sbjct 339470 AAGTAGGCAGGGACAGTGACAACAGC 339495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780804882977218