Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 4e-15 >seq1 Length=1009051 Score = 96.9 bits (106), Expect = 4e-15 Identities = 311/476 (65%), Gaps = 9/476 (2%) Strand=Plus/Minus Query 154629 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 154686 || |||||| | || | |||||||||| ||| || || | || ||| |||| |||| Sbjct 937191 CAGCCTAACTCTGGTGCTCAGGGTGAGTTTGCCGGTCT--TCGCTGCATCAAAGCCTACC 937134 Query 154687 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 154745 | | ||| || | || || |||| || || |||| || | || || || || Sbjct 937133 A-CGAGGCTCGCTCTGGCGAGAAGCGAAAGGTTTGCCTGATCCCCGTTTCTGCCCACGGT 937075 Query 154746 ACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG-- 154803 || || ||||| || | ||||| || ||||| || || ||||||||||| | Sbjct 937074 ACCAACCCTGCCTCGGCCGCTATGGCTGGCATGAAGGTCGTCACCGTCAAGTGTGACGGC 937015 Query 154804 ATGA-TGGTAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGAA 154862 | || ||||||| | ||||| | ||||| || || ||| | || | ||| Sbjct 937014 AAGACTGGTAACCTGGACATTGAGGATCTCAAGGCCAAGTGTGTCAAGCATGCTGATGAG 936955 Query 154863 CTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGA 154922 || | ||| ||| |||| ||||| || || |||||| ||||| | | |||| Sbjct 936954 CTCGCTGCTATCATGGTTACCTACCCCTCCACCTTTGGTGTTTTTGAGCCCGAGATTAAG 936895 Query 154923 CAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTA 154982 || | || | | ||||| || | ||||||| || || | || || || || | Sbjct 936894 CAAGTCTGCGATCTTGTTCACGAGCACGGTGGTCTCGTCTACATGGACGGTGCCAACATG 936835 Query 154983 AATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAAC 155042 || || ||| | || || || |||| ||| || ||||| || ||||| ||| Sbjct 936834 AACGCCCAGATCGGTCTTTGCTCTCCTGGTGATATTGGCGCTGATGTCTGCCATCTTAAC 936775 Query 155043 TTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 155098 | || || || ||||||||||| || || ||||| || ||||| || |||||||| Sbjct 936774 CTCCACAAGACCTTCTGTATTCCCCACGGTGGTGGTGGCCCTGGTGTCGGTCCTAT 936719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579210244223520