Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 >seq1 Length=1009051 Score = 118 bits (130), Expect = 1e-21 Identities = 317/478 (66%), Gaps = 9/478 (2%) Strand=Plus/Minus Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361 || |||||| | || | |||||||||| ||| || || | || ||| |||| |||| Sbjct 937191 CAGCCTAACTCTGGTGCTCAGGGTGAGTTTGCCGGTCT--TCGCTGCATCAAAGCCTACC 937134 Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420 | | ||| || | || || |||| || || |||| || | || || || || Sbjct 937133 A-CGAGGCTCGCTCTGGCGAGAAGCGAAAGGTTTGCCTGATCCCCGTTTCTGCCCACGGT 937075 Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG-- 159478 || || ||||| || || | ||||| || ||||| || || ||||||||||| | Sbjct 937074 ACCAACCCTGCCTCGGCCGCTATGGCTGGCATGAAGGTCGTCACCGTCAAGTGTGACGGC 937015 Query 159479 ATGA-TGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGAA 159537 | || ||| ||| | ||||| | ||||| || || ||| | || | ||| Sbjct 937014 AAGACTGGTAACCTGGACATTGAGGATCTCAAGGCCAAGTGTGTCAAGCATGCTGATGAG 936955 Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597 || | ||| ||| |||| || || || || |||||| ||||| | | || | Sbjct 936954 CTCGCTGCTATCATGGTTACCTACCCCTCCACCTTTGGTGTTTTTGAGCCCGAGATTAAG 936895 Query 159598 CAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657 || | || | ||||||| ||| | ||||||| || || | || ||||| || | Sbjct 936894 CAAGTCTGCGATCTTGTTCACGAGCACGGTGGTCTCGTCTACATGGACGGTGCCAACATG 936835 Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717 || || ||| | ||||| || |||| ||| || ||||| || ||||| ||| Sbjct 936834 AACGCCCAGATCGGTCTTTGCTCTCCTGGTGATATTGGCGCTGATGTCTGCCATCTTAAC 936775 Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTG 159775 | || ||||| ||||||||||| || || ||||| || ||||| || |||||||||| Sbjct 936774 CTCCACAAGACCTTCTGTATTCCCCACGGTGGTGGTGGCCCTGGTGTCGGTCCTATTG 936717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588048605224080