Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq9 315 1e-80 seq1 174 3e-38 >seq9 Length=510024 Score = 315 bits (348), Expect = 1e-80 Identities = 1158/1772 (65%), Gaps = 114/1772 (6%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || |||||||||||| || || || ||||||||||| ||||| Sbjct 508606 ACGGTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGTCTTG 508547 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 || || ||| |||||| | |||||| |||| ||| |||| | | || Sbjct 508546 AGACCGAGCTT---CCAGCCAGCGAAGTGCAT-GCTGGTGA---TCTTGCCCATGGTAG- 508495 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 |||| | || || || | ||| || |||||| ||| || ||||| | | Sbjct 508494 --GGTCCT--TCATG-------TGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACC 508446 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | |||||| ||||| | | | | || ||| || | ||||||||| |||||| | | Sbjct 508445 ACGGTCAGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAG 508386 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAG 212848 | |||| || | |||| | |||||||||||| | ||| || || ||| ||| Sbjct 508385 AGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAACC---GT-TAT---CAG 508333 Query 212849 C--TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACC 212900 | || | ||| ||| | ||| ||| || ||| || | || ||||| Sbjct 508332 CAATG-ATGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAGA 508274 Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960 || |||||||| | |||||| || || | || || | | ||||| | ||| || Sbjct 508273 AGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAG 508214 Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020 ||||| ||||| | || |||||||| || |||||||| | || ||||| || ||||| Sbjct 508213 GTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGCATA 508154 Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTG---CTCGCCGATGAGGCGC-CGAAGCTC 213076 ||||| || || |||||||| | | ||||| || | | | | | || || Sbjct 508153 GGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGAC----ATCCTCTCGGAGGGG 508098 Query 213077 TGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAA 213136 | |||||||||| | |||| | ||| || ||||||||||| ||||| | Sbjct 508097 TTCCCAGTCCCAAAGGTCAGAGGG---------CTTGACATTCCACATGTCGAACTGGAG 508047 Query 213137 GATGCCTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGG 213192 || || |||| | ||| ||| | | | | ||||||||| || | |||||| | Sbjct 508046 AATACC----CTCAGAGGCAGGGGAGCCTTTGAAGGTGGAGTAGGGACCTTCCTCCTTAG 507991 Query 213193 CCAGCTCGCAG-GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 | || | ||| || | |||||||||| ||||||||| || || || | | |||| Sbjct 507990 CGAGTT-GCACAGATGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTC 507932 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 |||| ||||| || ||| |||||||| | | |||| ||||||| || Sbjct 507931 AGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGA 507872 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370 || || || || | || ||||||| ||| | || ||| || |||| ||| | | Sbjct 507871 CCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGC-CTCTTGGAC 507813 Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430 ||||| |||| ||||||||||||||| | |||||| | |||| ||||| | Sbjct 507812 AGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTC 507753 Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACA-------AACTCAGGCA 213483 | ||| | || |||| |||||| | || | || | || ||||| Sbjct 507752 GTGCAGCTTCT------TGAAGTCGTAGCAAGCATCTT-CATAGTTGATGAAAGAAGGCA 507700 Query 213484 GGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCT 213543 | | | | ||| ||||||||||| || ||||| | || | | ||| || ||||||| Sbjct 507699 GAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCT 507640 Query 213544 CGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGG 213603 | |||||||||||| || ||||||||| || ||||||| ||| ||| ||||| | | Sbjct 507639 CAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGG-TTGCTCTTGCGATTG 507581 Query 213604 CAG-AATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGG 213662 ||| |||||||||||||||| | ||| ||||||||| ||||| | | || || | Sbjct 507580 CAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCG 507521 Query 213663 CTCCAGAGGTACCTGGCCTTGA-CCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACT 213720 ||| || | | ||||||| || || ||| | | | | | |||||||| Sbjct 507520 TACCAAAGCTTCTGAGCCTTGATAGACTTGC--GACCCTTAC---CCTCTCTCTCGTACT 507466 Query 213721 GTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGG--ATGC 213778 |||||| || | | ||||||| || || | || ||| | || |||| || | Sbjct 507465 TTTCGTACAGAGCCTCAAATTCGTCACCGTAG---CAGT-CAG-CAAGGCCAGGGCATTC 507411 Query 213779 G---GGACACATGAGGCTCCAGTCCCCGTCATCTCT-GACTCTCTGCATGAACAGGTCCG 213834 | || |||||||| |||| || |||| ||||| ||| | || |||||| || || | Sbjct 507410 GTTAGGGCACATGAGAGTCCATTCGCCGT-TTCTCTCGACACGCTTCATGAAAAGATCAG 507352 Query 213835 GGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGC 213894 ||| ||| || || ||||||||| | | | ||| ||| || ||| || | Sbjct 507351 GGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTC 507292 Query 213895 GCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGC 213954 | ||||| || || || |||| ||| |||||||| ||||| | ||||||||| ||||| | Sbjct 507291 GGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCAC 507232 Query 213955 CCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGA 214011 | || | |||| || |||||||| || | || ||||||| | ||||| | Sbjct 507231 CAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCA 507172 Query 214012 CGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA 214071 ||| || | |||||||| || || || || || || || ||||| | ||| | | Sbjct 507171 TGGGAACGATACCGTTGGAAGTACCATTAGTACCGGCGATGTAAGAGCCAGTGGCACGGA 507112 Query 214072 --GGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCT 214129 | || | | | || || || ||||| || |||||| |||||||| || | Sbjct 507111 TTCGGTGGGCGTTCA-AG-CCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTTTT 507054 Query 214130 CACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAA-GAAGCAGCTCG 214188 | || || ||| || | |||||||| || | | ||| ||| |||||| | Sbjct 507053 GAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCA-TATCAACAAGGAAGCATGATG 506995 Query 214189 AGAGCTGGGGC-CTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAAC 214247 | ||||| ||| |||| | || | |||||| | |||||||| ||||| | | ||| Sbjct 506994 AAAGCTGAGGCTGTGGA-GTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAAC 506936 Query 214248 TTGTTAGAGAGGAGCCTGTAGGTCTCCAGGAC 214279 ||| | || | ||| |||| ||||||| ||| Sbjct 506935 TTGCTTGACATGAGGTTGTATGTCTCCAAGAC 506904 >seq1 Length=1009051 Score = 174 bits (192), Expect = 3e-38 Identities = 486/739 (66%), Gaps = 28/739 (4%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 158803 CTGGTAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 158862 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGTGTCAGGCCCATCTGTTCCA 47954 ||||||| ||| ||||||| | || |||||| ||| | | | | | | Sbjct 158863 CATGAAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGANNTGAGAGCAA 158922 Query 47955 GCAGGTGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTA 48011 ||| || || |||||| | |||||||| | ||||||| || ||||||||| | Sbjct 158923 CGAGGAGACGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGA 158982 Query 48012 TGAGGG-ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCC 48070 |||| ||| ||| | ||||| || |||||||||| ||| || ||||| || Sbjct 158983 GCAGGGCACAAGGG-AGAGCCTCAGTAAGAAACTCCTGCTCAATAGAAACGGCATCGGTG 159041 Query 48071 ACAATCTGCTTAACGCGGGAC-TCTGAGGGTTTGTTGCGCAGGTGC-TTG------GCAT 48122 | ||| | || || | |||| |||| || ||| || | ||| | | Sbjct 159042 ATAATGTCCT------GGATCATCTG----TTTGCTG-GCACGTCCCTTGAGGTGAGAGT 159090 Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 ||| | ||||||||||| |||| | || || || || |||||| |||| || | Sbjct 159091 GGAGGAGACAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAA 159150 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 ||| ||||||||||||| || | || ||||||||||| || | || || | || Sbjct 159151 AGCTCAGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGC 159210 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 ||||||||| ||||| || || || || || || | || | || | || ||||| Sbjct 159211 TGAAGAAGATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAGTTCT 159270 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 | || |||||| | ||||| || |||||||| |||||| || || || || | Sbjct 159271 TATCCTGGATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAA 159330 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTG 48422 ||| |||||| | | | || | | |||| | |||||| || || | Sbjct 159331 CGGCGTTGAAGAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGAG 159390 Query 48423 CGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCT 48482 ||| | || ||||| | ||||| || ||||||||| || |||||| | |||| Sbjct 159391 AGTATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCT 159450 Query 48483 CAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTG 48542 | | ||| || || | ||||| ||| | |||||||||||||| || || || | Sbjct 159451 CGGGGATCTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGG 159510 Query 48543 AAGCAGCAAAGAAGGCAAG 48561 | ||||| ||||| ||||| Sbjct 159511 AGGCAGCGAAGAAAGCAAG 159529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931528689611520