Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1 161 2e-34 seq9 138 2e-27 >seq1 Length=1009051 Score = 161 bits (178), Expect = 2e-34 Identities = 383/570 (67%), Gaps = 9/570 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||| || || ||||| ||||| Sbjct 159655 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 159596 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAA---AGACGAGCAGCATTTTCTCAAG 25593 ||||||| | ||| |||| || | || | ||||||||| | || || Sbjct 159595 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 159536 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || ||||| || ||||| || || || || || |||||||| ||| || Sbjct 159535 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCGA 159476 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | | || || ||| | ||||| || ||||| ||||||||||| || Sbjct 159475 TTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGATG 159416 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGTCGC 25772 || || | ||||| || || | || | ||| || ||||| | ||| || Sbjct 159415 GAGAACATCCACTCCGAAACATACTCTCTCCTCATCGAT-ACCTACATCAAGGACCCTGC 159357 Query 25773 CGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAGGCG 25830 | || | | || || || ||| | || ||| || || ||||| | ||||||| Sbjct 159356 CCAGCGTACATAC-CTCTTCAACGCCGTTGA-CACTATTCCTTGCATCCGAAAGAAGGCG 159299 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 |||||||| |||||| | ||| | |||| |||| |||| || || || Sbjct 159298 GATTGGGCCATCCGATGGATCCAGGATAAGAACTCTACCTTTGCTCAGCGTCTTGTTGCT 159239 Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAG 25950 |||||||| || ||||| ||||| ||||||||| | ||||| ||||||||||||||||| Sbjct 159238 TTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCAAG 159179 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || || |||||| || ||| |||||| ||||||||||| | || |||||| Sbjct 159178 AAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAGGGT 159119 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 || |||| || |||||||| || ||| || Sbjct 159118 CTTCACACCGACTTTGCCTGTCTCCTCCAC 159089 >seq9 Length=510024 Score = 138 bits (152), Expect = 2e-27 Identities = 705/1103 (64%), Gaps = 51/1103 (5%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || ||||||||||||||||||||||| ||||| |||||| || ||| | ||||| || Sbjct 507973 GTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAG-CTCACGAGCCTCAGG 507915 Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 ||| |||||||| || || | ||| | || || || || || || || | ||| Sbjct 507914 AGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGACCTTGCACACCAAGACC 507855 Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593 ||||| | ||| | | ||||| | || || ||| | || || || ||||||| Sbjct 507854 AATGGGTCGGTGACGCATGTTGCTGTTACGA--GCCTCTTGGACAGGGTAGTGGTTGACG 507797 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 ||||| | ||||| | || | | |||| | |||||| |||||||| | Sbjct 507796 TCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCGTGCAGCTTCTTGAAG 507737 Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713 | | | ||| | | || | || | | | || || || | | | | Sbjct 507736 TCGTAG--CAAG----CATCTTCAT--AGTTGATGAAAGAAGGC----AGAGACAAGGAG 507689 Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 || ||||| || || || ||||| || | | || | |||||||| || || ||| Sbjct 507688 GCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGG 507629 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCCTT 221832 ||| || |||||| || |||| || || || |||||||||| ||| | ||||| Sbjct 507628 TTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGATTG-CAGTGATCCTT 507570 Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892 ||||||||| || || || ||||| ||| ||| | ||||| || ||| || | Sbjct 507569 GTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGCT- 507511 Query 221893 TCTG-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTAT 221945 |||| || | | | | | ||| | | | |||| |||||| ||| Sbjct 507510 TCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTAC------- 507458 Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACA 222005 ||||| | |||| | |||||||| || | ||||| || || | || |||| Sbjct 507457 AGAGCCT--CAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACA 507400 Query 222006 TCAGACTCCAGTGCTTGTTGTCTTT-GACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064 | ||| |||| | ||| ||| | ||| | || |||||| || || |||||||| || Sbjct 507399 TGAGAGTCCATTCGCCGTT-TCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGA 507341 Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124 || || || || | | || ||||||| |||| ||| || | ||||| | Sbjct 507340 GCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGG 507281 Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184 ||||| || | ||| |||||||| ||||| || |||| ||| | || || ||||||||| Sbjct 507280 AACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTG 507221 Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAG 222243 || |||||||| | || | | ||| | |||||| | || || | || || | Sbjct 507220 TTACCACCCTGGT-CAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGAT 507162 Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTTACT 222300 |||||||| ||| || || || ||||| | || ||| | | ||| Sbjct 507161 ACCGTTGGAAGTACCATTAGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGT---G 507105 Query 222301 GGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360 ||| || ||| |||||||| || || || |||||||| || | ||||| || || Sbjct 507104 GGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTTTTGAGGGTATC 507045 Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420 ||| || || || ||||||||| | | | || || || || || | ||||| Sbjct 507044 GTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGG 506985 Query 222421 TTTGGTGGA--ACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478 | ||||| || |||||| || | ||||| || || || || ||| | || ||| Sbjct 506984 CT--GTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGAC 506927 Query 222479 ATCAGATCGTACGTCTCTACGAC 222501 || || | ||| ||||| | ||| Sbjct 506926 ATGAGGTTGTATGTCTCCAAGAC 506904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928840701472320