Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1 104 3e-17 >seq1 Length=1009051 Score = 104 bits (114), Expect = 3e-17 Identities = 332/508 (65%), Gaps = 9/508 (2%) Strand=Plus/Plus Query 138187 CAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAAT 138246 |||||||||| || ||||| || ||||| || || ||||||||||| ||||| || | | Sbjct 936717 CAATAGGACCGACACCAGGGCCACCACCACCGTGGGGAATACAGAAGGTCTTGTGGAGGT 936776 Query 138247 TTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTA 138306 | ||||| || ||||| || ||| |||| || ||||| | ||| || || | Sbjct 936777 TAAGATGGCAGACATCAGCGCCAATATCACCAGGAGAGCAAAGACCGATCTGGGCGTTCA 936836 Query 138307 GATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGTC 138366 || ||||| || | || || ||||||| | || ||||| | | || | || Sbjct 936837 TGTTGGCACCGTCCATGTAGACGAGACCACCGTGCTCGTGAACAAGATCGCAGACTTGCT 936896 Query 138367 TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGTT 138426 | || | | ||||| |||||| || || || || |||| ||| ||| | ||| | Sbjct 936897 TAATCTCGGGCTCAAAAACACCAAAGGTGGAGGGGTAGGTAACCATGATAGCAGCGAGCT 936956 Query 138427 CAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA-TCAT-- 138483 || | || | ||| || || ||||| | ||||| | ||| ||| || | Sbjct 936957 CATCAGCATGCTTGACACACTTGGCCTTGAGATCCTCAATGTCCAGGTTACCAGTCTTGC 937016 Query 138484 CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTC 138543 | ||||||||||| || || ||||| || ||||| | || ||||| || || | Sbjct 937017 CGTCACACTTGACGGTGACGACCTTCATGCCAGCCATAGCGGCCGAGGCAGGGTTGGTAC 937076 Query 138544 CATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCTGATCCTTGATGA 138602 | || || || | || ||||| || || |||| || || | || ||| | || Sbjct 937077 CGTGGGCAGAAACGGGGATCAGGCAAACCTTTCGCTTCTCGCCAGAGCGAGCCTCG-TGG 937135 Query 138603 TATGCTTGGAT--TGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTGTA 138660 || |||| ||| || | || || ||| |||||||||| | || | |||||| || | Sbjct 937136 TAGGCTTTGATGCAGCGA--AGACCGGCAAACTCACCCTGAGCACCAGAGTTAGGCTGCA 937193 Query 138661 ATGATATAGAATCAAAACCTGTGATATC 138688 | | ||| || | ||| ||||| || Sbjct 937194 GAGTTGTAGCGTCCATACCAGTGATCTC 937221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578995845169560