Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq65 114 2e-19 seq9 113 6e-19 seq89 104 3e-16 seq1 91.5 2e-12 >seq65 Length=182818 Score = 114 bits (126), Expect = 2e-19 Identities = 86/101 (85%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1592192 AACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATC 1592251 ||||||||||| |||||||| || ||||| |||| |||||| | || |||||||||||| Sbjct 86145 AACTACCTCGATATCAAGCCCCTTCTCGACGTTGGATGCAAGACCGTCGCCAACATGATC 86086 Query 1592252 AAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292 ||||||||| | |||||||| ||||| |||||||| || || Sbjct 86085 AAGGGCAAGGCACCCGAGGAAATCCGTAAGACCTTCAATAT 86045 >seq9 Length=510024 Score = 113 bits (124), Expect = 6e-19 Identities = 205/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| || || |||| ||| || || || |||||||| |||| |||||||| Sbjct 507212 CTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGA 507153 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 || || || || || | ||| | ||| | ||| || | ||| ||| ||||| Sbjct 507152 AGTACCATTAGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAAGCC 507093 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || || ||| |||||| || | || || |||||| || |||||||| || || Sbjct 507092 AATACCACCAGCCATCTTGGAAATCATGGCACAAGTTTTGAGGGTATCGTAGATACCATC 507033 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| ||||||| || || || ||||| || || || || || | || || Sbjct 507032 AATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACC 506973 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||| | ||||| | || ||||| |||| | |||||| || ||| || Sbjct 506972 GGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTATGT 506913 Score = 87.8 bits (96), Expect = 2e-11 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||| || || | || ||||| || || ||| ||||||||| |||||||||||| || Sbjct 507348 TCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGA 507289 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 1628582 | || || | |||| | |||||||||||| ||||| |||||| ||| ||||| || Sbjct 507288 GATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACC 507231 >seq89 Length=36439 Score = 104 bits (114), Expect = 3e-16 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||| ||||| || || || ||||| ||||| | ||| | || ||||||||| Sbjct 31267 GACAGCACTGGCGGAACCGTCACCTGCGTCATCCGCAATGCGCCCTCTGGTCTCGGCGAG 31326 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | ||||| | ||||||||||||||| |||| ||||| ||| | Sbjct 31327 CCCTGCTTCGACAAGCTGCAGGCCACCCTCGCCCACGCCATGATGTCCATCCCCGCCGTC 31386 Query 19167 AAGGGATTCGAG 19178 |||| |||||| Sbjct 31387 AAGGCCTTCGAG 31398 >seq1 Length=1009051 Score = 91.5 bits (100), Expect = 2e-12 Identities = 176/251 (70%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGC-CCG-AGA 869273 || || ||||||||||| |||||||||||||| |||||| | || || || ||| || Sbjct 159156 AGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATG--GAAGCAAAGGCACCGCTGA 159213 Query 869274 AAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCT 869333 | ||||| ||||| ||||| ||||| | | || |||| |||||| || || | || Sbjct 159214 AGAAGATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAG--GTAGA-GTTCT 159270 Query 869334 CCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGA 869393 | | |||||| || ||||| || ||||| || | | | || | ||||| | Sbjct 159271 TATCCTGGATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAA 159330 Query 869394 TGGCGCGAAAGAGGT-GGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGC 869452 |||| ||||||| || | | ||| |||||||||| ||||| ||||| ||||| Sbjct 159331 CGGCGTTGAAGAGGTATGTAC-GCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGA 159389 Query 869453 GAATAGGTCTC 869463 || || || || Sbjct 159390 GAGTATGTTTC 159400 Score = 89.7 bits (98), Expect = 6e-12 Identities = 174/257 (68%), Gaps = 8/257 (3%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || | |||||| |||||| |||||||||||||| | || ||||| Sbjct 158798 GCCTTCTGGTAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATG 158857 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | |||||| ||| ||| ||||| | | Sbjct 158858 TTCTCCATGAAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGANNTGAG 158917 Query 868811 AGCA-------GGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCAT 868863 |||| | || || ||||| || ||||||||||| ||||||| || |||||| Sbjct 158918 AGCAACGAGGAGACGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCAT 158977 Query 868864 GCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923 ||||| || || || || | ||| | | |||||| | ||| || ||||| || Sbjct 158978 GCCGAGCAGGGCACAAGGGAGAGCCTCAGTAAGAAACTCCTGCTCAATAGAAACGGCATC 159037 Query 868924 GACGATGATCTGCCTGG 868940 | ||| || | ||||| Sbjct 159038 GGTGATAATGT-CCTGG 159053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107110231166901