Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 149 1e-29 seq65 114 2e-19 seq316 104 4e-16 >seq1 Length=1009051 Score = 149 bits (164), Expect = 1e-29 Identities = 223/309 (72%), Gaps = 11/309 (4%) Strand=Plus/Plus Query 794362 TCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAG 794421 ||||| ||||| || || ||||||||||| |||||||||||||| ||||||| | | Sbjct 159141 TCGTTAGAAAAGCTCAGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAA--G 159198 Query 794422 AAACTGC-CCGA-GAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAA 794479 || || ||| ||| ||||| ||||| ||||| ||||| | || || |||| |||| Sbjct 159199 CAAAGGCACCGCTGAAGAAGATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAA 159258 Query 794480 AAGTGTCCAG-GCCCTCTTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACC 794538 | || || | || | | |||||| || ||||| || ||||| || | | Sbjct 159259 AGGT----AGAGTTCTTATCCTGGATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATG 159314 Query 794539 GAGGGCACCGTGTCGATGGCGCGAAAGAGGTG-GTCCTTCTCGACCGGGTCCTTGACGTA 794597 | || | ||||| | |||| ||||||| || | || | | |||||||||| ||| Sbjct 159315 CAAGGAATAGTGTCAACGGCGTTGAAGAGGTATGTACG-CTGGGCAGGGTCCTTGATGTA 159373 Query 794598 GGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCC 794657 ||| ||||||||||| ||||| || || ||||||||||| || || ||||||||| || Sbjct 159374 GGTATCGATGAGGAGAGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACC 159433 Query 794658 ATAAAAGCA 794666 ||| ||||| Sbjct 159434 ATAGAAGCA 159442 Score = 95.1 bits (104), Expect = 2e-13 Identities = 169/240 (70%), Gaps = 10/240 (4%) Strand=Plus/Plus Query 793917 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 793976 |||||| |||||| |||||||||||||| | || ||||| |||||| | ||| Sbjct 158816 ACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATGAAGTCGAAA 158875 Query 793977 GGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGC---GAC-GCAAGCAGG---CGGTC 794029 ||||||| | | ||| ||||||| ||||| || |||| ||| || || Sbjct 158876 GGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGANNTGAGAGCAACGAGGAGACGATC 158935 Query 794030 GGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGC-CACGG 794088 ||||||||||| |||||||| ||||||| || ||||||||||| || || || || Sbjct 158936 AGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGGGCACAAGG 158995 Query 794089 GCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGG 794148 | || | ||| | | |||||| | ||| || ||||| ||| |||| || | ||||| Sbjct 158996 G-AGAGCCTCAGTAAGAAACTCCTGCTCAATAGAAACGGCATCGGTGATAATGT-CCTGG 159053 >seq65 Length=182818 Score = 114 bits (126), Expect = 2e-19 Identities = 86/101 (85%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 2035653 AACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATC 2035712 ||||||||||| ||||||||||| ||||| | || ||||||||||| |||||| | ||| Sbjct 86145 AACTACCTCGATATCAAGCCCCTTCTCGACGTTGGATGCAAGACCGTCGCCAACATGATC 86086 Query 2035713 AAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753 ||||||||| | |||||||| ||||| |||||||| || || Sbjct 86085 AAGGGCAAGGCACCCGAGGAAATCCGTAAGACCTTCAATAT 86045 >seq316 Length=200512 Score = 104 bits (114), Expect = 4e-16 Identities = 78/92 (85%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| ||||||||||||||||| |||||||||||| |||| || || ||| | | Sbjct 4508 GTACTTGGTAACGGCCTTGGTACCCTCGGAGACGGCGTGCTTGGCAAGCTCACCGGGGAG 4449 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| ||||| || | |||||||||||| |||| Sbjct 4448 GATGAGGCGGACAGAGGTCTGGATCTCTCGGG 4417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916208849779967