Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq9 187 2e-42 seq219 134 1e-26 seq328 123 2e-23 seq337 107 2e-18 seq312 84.2 2e-11 >seq9 Length=510024 Score = 187 bits (206), Expect = 2e-42 Identities = 1113/1758 (63%), Gaps = 61/1758 (3%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTT 148109 ||||| ||| |||||||| || ||||||||||| ||||| | ||| |||||| Sbjct 508471 GACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCACAACCTGTCGCTGA 508412 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 |||||||| | ||||||||||| |||||| | | || ||| | |||| Sbjct 508411 GAA---ATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATG 508355 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | || ||| | |||| || | || ||| | || | | || Sbjct 508354 TTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCC 508295 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | |||| || || | || || | | || || ||||| |||||||| || || || Sbjct 508294 ATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACT 508235 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || || | || | |||| || | || ||||| | ||||||||||| | ||||||| Sbjct 508234 CGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGC 508175 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | ||| | || || ||||| || || ||||| |||||| | |||| || | || Sbjct 508174 GAGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTG 508115 Query 148410 ATTTTGCGCTTCAGAGCCG--CCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGT 148467 | | | || ||| | |||||||||| || || || | || |||||||||| Sbjct 508114 ACAT--CCTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAGGGCTTGACATTCCACATGT 508057 Query 148468 CGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCG 148527 || |||| ||||| || || ||| ||| | | | | | ||| || || | | Sbjct 508056 CGAACTGGAGAATACCCTCAGAGGCAGGGGAGCCTTTGAAGGTGGAGTAGGGACCTTCCT 507997 Query 148528 CCGCCGCCAGTT-CGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGC 148586 || || |||| | ||| | | || || ||| ||| || |||||| |||||| Sbjct 507996 CCTTAGCGAGTTGCACAGAT-GTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGC 507938 Query 148587 CTGTTGAGC---AGCGCCGC-CGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGC 148642 |||| ||| | ||| | || | || | ||||| || || | || || Sbjct 507937 TTGTTCAGCTCACGAGCCTCAGGAGAC----TCAAAGGGCATGCGGAGGGCAAGGAAGGC 507882 Query 148643 GTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGC 148702 || ||||| || || || || | |||||||| ||||| |||||| | || || Sbjct 507881 ATCAGCAAGACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGC 507822 Query 148703 GCTC-TCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCT 148761 ||| | || || ||||||||| |||||||||||||| | |||||| || || || | Sbjct 507821 -CTCTTGGACAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTT 507763 Query 148762 TTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTAC------GATGCATCGGT 148815 || | | ||||| | || ||||| ||||| | |||| | Sbjct 507762 GAGTGACCTCGTGCAGCTTCTTGAAGTCGTAGCAAGCATCTTCATAGTTGATGAAAGAAG 507703 Query 148816 TCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGA 148875 || | | ||||| || ||||| || || |||||| ||||||| ||| || | || Sbjct 507702 GCAGAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGA 507643 Query 148876 TCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGT 148935 |||| | |||||| ||| || | ||| || | ||||||||| |||||||||| | Sbjct 507642 TCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGAT 507583 Query 148936 TGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT-- 148993 |||| |||||||| |||||| | || || || || ||| | || | || Sbjct 507582 TGCAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGG 507523 Query 148994 -GAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT---CCT---GCT 149046 | ||| | || | ||| || |||| | | | |||||||| ||| || Sbjct 507522 CGTACCAA---AGCTTCTGAGC-----CTTGATAGAC-TTGCGACCCTTACCCTCTCTCT 507472 Query 149047 CGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCA 149104 |||| | ||| | ||| ||| || | || |||||||| || | || || ||||| Sbjct 507471 CGTACTTTTCGTACAGAGC--CTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCA 507414 Query 149105 CTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATC 149164 | || ||||||||||| | ||| |||||| | || |||||||| || ||||| Sbjct 507413 TTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATC 507354 Query 149165 GGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCG 149224 || | ||| || || | | ||||| || || | || || || ||| Sbjct 507353 AGGGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTT 507294 Query 149225 GCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGC 149284 || || | || | ||| | ||| |||||||| ||||||| ||| | |||| || Sbjct 507293 TCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGC 507234 Query 149285 GCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAAC 149341 || |||||| || |||||||| |||| || | ||||||| ||||| || | Sbjct 507233 ACCAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAG 507174 Query 149342 CATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCG 149401 ||| || | || || ||| ||| || |||||| | ||| | ||| || || Sbjct 507173 CATGGGAACGATACCGTTGGAAGTACCATTAGTACCGGCGATGTAAGAGCCAGTGGCACG 507114 Query 149402 CACTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGC 149460 | | ||| |||| | ||| || || || ||| | ||| || || || || Sbjct 507113 GATTCGGTGGGCGTTCAAGCCAATACCACCAGCCAT-CTTGGAAATCATGGCACAAGTTT 507055 Query 149461 CGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGC-AGAAAGCACGAG 149519 ||| || |||||| || || |||||||| |||||| ||| | || ||||| || Sbjct 507054 TGAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCAT-ATCAACAAGGAAGCATGAT 506996 Query 149520 CACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATA 149578 | | || || | || ||||| ||| | |||||||| || || || || | Sbjct 506995 GAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAAC 506936 Query 149579 TTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCC 149638 || || | ||| | | ||| | ||| | || || || || || || || ||| || Sbjct 506935 TTGCTTG-ACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGATTCC 506877 Query 149639 TATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAG 149698 | ||||| ||||| | |||||||||||| ||||| || | |||| |||| | || Sbjct 506876 AACAGCGACTCGCATGATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCTGTAG 506817 Query 149699 CAAGTA-GCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGT 149757 |||||| | | | || || | ||||||| || ||||||| |||||||| | | Sbjct 506816 CAAGTATGATCTGGACAAG-GTTCGGAAGCCAAAATAGTTGTAGTTGAAGTCGCGATCAT 506758 Query 149758 GGTCAATGGCGGCGTCGA 149775 | |||| || | ||||| Sbjct 506757 AGACAATCGCTGAGTCGA 506740 >seq219 Length=322996 Score = 134 bits (148), Expect = 1e-26 Identities = 156/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| ||||| || ||||| |||| || ||| | | | |||||||| Sbjct 33550 AAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAG 33608 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | || || ||||||||||| || ||||| || |||||||| ||| Sbjct 33609 CTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGAT 33668 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | |||| ||||||| | |||||| || | ||||| || || || Sbjct 33669 CTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCC 33728 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || || ||||||||||||||| Sbjct 33729 CGTGAGGGTCTTGACGAAAATCTGCATG 33756 >seq328 Length=334975 Score = 123 bits (136), Expect = 2e-23 Identities = 149/200 (75%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | ||| | | | ||||||||||||||||| Sbjct 397 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 455 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | |||||||| || ||||||||||| |||||||| |||||| ||| Sbjct 456 GGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTT 515 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||||| | ||| || |||| ||| | || |||||||||| || Sbjct 516 CACATTGTCGATGGTGTCGGATGACTCAACCTCGAGGGTAATAGTCTTGCCGGTCAAGGT 575 Query 133643 TTTTACGAAAATCTGCATGG 133662 || ||||| |||||||||| Sbjct 576 CTTGACGAAGATCTGCATGG 595 >seq337 Length=1491250 Score = 107 bits (118), Expect = 2e-18 Identities = 119/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| ||| | || | |||||||| || || |||||||| |||||| Sbjct 838418 TCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCCGGGGGGATGCCCTCCTTG 838359 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | | ||| || |||| ||||| | Sbjct 838358 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGGGTGATG 838299 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATGGC 133663 || ||||| ||||| || || |||||| ||| ||||| Sbjct 838298 GTCTTGCCCGTCAGGGTCTTCACGAAA--CTGGATGGC 838263 >seq312 Length=363204 Score = 84.2 bits (92), Expect = 2e-11 Identities = 89/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| || || ||||| || ||||| ||| | || ||| ||||||||||||||||| Sbjct 363085 GGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACC-GTCCTCGAGCTGCTTGC 363143 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 | ||| |||| | |||||||| || ||||||||||| |||||||| |||||| Sbjct 363144 CGGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTT 363198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418666905720