Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1 181 2e-39 >seq1 Length=1009051 Score = 181 bits (200), Expect = 2e-39 Identities = 357/513 (70%), Gaps = 24/513 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| ||||||||||| ||||| || |||||| |||| | Sbjct 159656 GATCTGGCAAATGTAC-AAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATC 159598 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTCGCTGAGCGAC----GACGAGCGCCATTT 1455886 || | || |||| ||||| | || ||| ||||||| | || Sbjct 159597 TCTCCAAGGATCTCCACG----ACTGGAACAACC-GATTGACTTCAGACGAGCAATACTT 159543 Query 1455887 CATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGG 1455946 |||| ||| | || || ||| ||||| ||| ||| |||||||| ||||| || | Sbjct 159542 CATCTCCCACATTCTTGC-TTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTG 159484 Query 1455947 CCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006 | || || | |||||||| | || ||||| || | || || || ||||||| Sbjct 159483 TTGAGCGATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGA 159424 Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066 || || || ||||||||||| ||||| ||||| ||||| ||||| |||||| |||||| Sbjct 159423 TCATGATGGAGAACATCCACTCCGAAACATACTCTCTCCTCATCGATACCTACATCAAGG 159364 Query 1456067 ACCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 |||| | | || | || ||||||| |||| | ||||| | || | | | || Sbjct 159363 ACCCTGCCCAG-CGTACATACCTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAG 159305 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGC 1456185 ||||| || ||||| || |||||| | | | | ||| || |||||| |||| | Sbjct 159304 AAGGCGGATTGGGCCATCCGATGGATCCAGGA-TAAGAACTCTAC-CTTTGCTCAGCGTC 159247 Query 1456186 TCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTC-TCGG-GCAGTTTCTGCGCCATCTT 1456242 | || | ||||| | ||| ||||| ||||| ||| ||| || || || ||||||| Sbjct 159246 TTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCT--TCCATCTT 159189 Query 1456243 TTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||||||| ||||||||||| ||||| Sbjct 159188 CTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCT 159156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177777152501186