Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq9 214 2e-50 seq1 96.9 4e-15 >seq9 Length=510024 Score = 214 bits (236), Expect = 2e-50 Identities = 1008/1583 (64%), Gaps = 41/1583 (3%) Strand=Plus/Minus Query 110524 AATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTG 110583 ||| ||||| || || || ||| |||||| || | ||||| | | ||| ||||| Sbjct 508409 AATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTG 508350 Query 110584 GATGGAACCCCCCGCCTTCACCA----TGAGATCCTTCATATCCTTGGACCAGAGACCAA 110639 ||| ||||| | ||| || || | | ||||||| | | |||||| ||||| | Sbjct 508349 GATAGAACC----GTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCA 508294 Query 110640 TCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTC 110699 | | || || |||| || |||||||| ||||| || || ||| || Sbjct 508293 TGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTC 508234 Query 110700 TTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTG 110759 | |||||||||| | ||||| || ||||||||||| || || || | || || | Sbjct 508233 GGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCG 508174 Query 110760 CGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGA 110819 ||| ||| || ||||| || || | | |||||||| || | ||| | ||||| Sbjct 508173 AGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGA 508114 Query 110820 TGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTC 110877 || ||| |||||||| | | | || || || || |||| ||||||| Sbjct 508113 CATCCTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG-GGCTTGACATTCC-ACATGTC 508056 Query 110878 AAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGC 110937 ||||| || | || | || || || || || | ||||| |||| ||||| | Sbjct 508055 GAACTGGAGAATACCCTCAGAGGCAGGGGAGCCTTTGAAGGTGGAGTAGGGACCTTCCTC 507996 Query 110938 TTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAG 110996 | ||| | || ||||| | | |||| ||||| || ||||| || ||||| | Sbjct 507995 CTTAGCGAGTTGCACAGATGTAGTA-AGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCT 507937 Query 110997 CATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCG 111056 |||| ||| || ||| || ||||| | |||| || || |||| | Sbjct 507936 TGTTCAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAG 507877 Query 111057 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 111116 | |||||||| ||||| | |||||| |||| ||| ||||| || || || || | Sbjct 507876 CAAGACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTT 507817 Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176 || || || || ||| |||| ||| | ||| | ||||| | |||| Sbjct 507816 GGACAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGA 507757 Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAA 111233 || || || || | | || | || || ||||||| ||| | || | Sbjct 507756 CCTCGTGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATGAAAGAAGGCA 507700 Query 111234 GGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTT 111293 | | | || || | ||||||||||| |||||| | ||| || | || | Sbjct 507699 GAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCT 507640 Query 111294 CTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGC 111353 | || || | |||||| || || || || | ||||||||||| ||||| |||| Sbjct 507639 CAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGATTGC 507580 Query 111354 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCT 111413 | |||||||||||||||| | || | || ||||| ||||| | | ||||| || | Sbjct 507579 AGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGT 507520 Query 111414 TCCAAA-CATCGGCGGCTGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTG 111470 ||||| | || | | || | || | | ||| ||| | ||||| |||||||||| Sbjct 507519 ACCAAAGCTTCTGAGCCTTGATAGACTTGCGA---CCCTTACCCTCTCTCTCGTACTTTT 507463 Query 111471 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGA 111529 ||| || || ||||| || ||||| ||| | || || || || || || || Sbjct 507462 CGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGGG 507404 Query 111530 CAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589 || | |||| ||||| || | ||| || |||||||||||||| || || ||||| Sbjct 507403 CACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAA 507344 Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649 || | | | || || || | | || |||| || | ||| ||||| ||| | ||| Sbjct 507343 AGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCA 507284 Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCC 111703 |||||||| | || || ||||||||||||||||| |||| |||| || || | Sbjct 507283 AGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGC 507224 Query 111704 TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 111763 || | ||| | || | || || || || ||| ||| || || || ||||| ||| Sbjct 507223 TTGTTA---CCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGA 507167 Query 111764 ATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCA 111823 | ||||| | || |||||| || || || ||| | |||| | | Sbjct 507166 ACGATACCGTTGGAAGTACCATTAGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGG 507107 Query 111824 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 111883 ||| || || |||||||| |||||| ||| || || ||||| | || || Sbjct 507106 TGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTTTTGAGGGTA 507047 Query 111884 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 111943 | |||||||| | || ||||||||| | | | ||||||||| || | ||| Sbjct 507046 TCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGA 506987 Query 111944 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GG 112001 || ||| ||||| || ||||| | || || |||| ||| ||| | | |||| | Sbjct 506986 GGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGCTTG 506929 Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061 |||| || |||||||||||||||| ||||| || || || ||| || | |||| Sbjct 506928 ACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGA 506869 Query 112062 CCCGCATGAACATGTACTGTGGG 112084 | ||||||| ||| | ||| ||| Sbjct 506868 CTCGCATGATCATATGCTGCGGG 506846 >seq1 Length=1009051 Score = 96.9 bits (106), Expect = 4e-15 Identities = 335/516 (65%), Gaps = 37/516 (7%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| | || |||||||| |||||||||||||| || ||||| ||||| ||||| Sbjct 158807 TAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 158866 Query 122431 AAGTCAAATGGATT---------------CTTCGCGTTCCAAATGGGTGGCACCCCAACT 122475 ||||| || || || |||| |||| | | || | | ||| Sbjct 158867 AAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGANNTGAGAGC--AAC- 158923 Query 122476 TGTTTGAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATA 122535 |||||||||||| | || | || ||||||| ||| | |||||||| Sbjct 158924 -----GAGGAGACGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATG 158978 Query 122536 CCGATGAGGTTACATGGGAGTGCGTCC--AAGATGAACCCTTTCTCAATCTCAACCGCCT 122593 |||| ||| ||| ||||| || || |||| ||| | | |||||| ||| || | Sbjct 158979 CCGAGCAGGGCACAAGGGAGAGCCTCAGTAAGA--AACTCCTGCTCAATAGAAACGGCAT 159036 Query 122594 CTTTCACGATGGCGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGA 122650 | | | ||| | ||||| | | | ||| ||| || | || | || || Sbjct 159037 CGGTGATAATGTCCTGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGA 159096 Query 122651 GCTCCACGGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGC 122710 | || |||||| || ||| ||||||||||| || ||||| || || || || |||| Sbjct 159097 GA--CA-GGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGC 159153 Query 122711 ATAGACCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAG 122769 ||||| |||||||| || |||||||| | ||| | || | ||| || | ||| | Sbjct 159154 TCAGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTG 159212 Query 122770 AAGAAGATACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG-AGCGAGACTT 122828 |||||||||||||| || ||||| |||| ||| || | || |||| || | ||| Sbjct 159213 AAGAAGATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAG-TTCTT 159271 Query 122829 TGCATCAAACCATTTCATTGCCCATTTCGCCTTCTT 122864 | | | |||| || ||||| | ||||||||| Sbjct 159272 ATCCTGGATCCATCGGATGGCCCAATCCGCCTTCTT 159307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029228808800