Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq9 250 3e-61 seq328 185 1e-41 seq219 170 2e-37 seq312 131 2e-25 seq316 127 2e-24 seq337 111 2e-19 seq1 100 3e-16 >seq9 Length=510024 Score = 250 bits (276), Expect = 3e-61 Identities = 1133/1763 (64%), Gaps = 70/1763 (4%) Strand=Plus/Minus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 ||| | || || || ||||||||||| |||||||| || ||||||||| | |||| Sbjct 508579 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 508520 Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151 || ||| ||| | | || |||| || |||| ||||| ||||||||||||||| Sbjct 508519 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 508460 Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCAT-TTCAATAATTGACTTTTGTGGAATTTCCCA 80210 ||||| || ||||| || || ||||| | || | || | || | ||| ||||| Sbjct 508459 TCAATGAAGGCACCACGGTCAGCAGCCATCTGCACAACCTGTC-GCTGAGAAATCTCCCA 508401 Query 80211 TACTGTACGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGATTTTGCACACTGCC 80267 || || |||| |||| | ||| | || |||| | | | | | Sbjct 508400 CACAGTCTTGTACAGAGCCTT---GATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGA 508344 Query 80268 ACCGTCCTTTACA---ATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAG 80324 ||||| | || || | || |||| || | ||| | ||| | | | || Sbjct 508343 ACCGTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAG 508284 Query 80325 ATCTTTCACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAG 80381 ||| || | ||| | | ||| || | || ||||| || || ||| || || | Sbjct 508283 ATCCTTGAGAAGCCAGGGGTTGACAA-CCTG--GAACTCGCCAGCAAGGACTCGGCGTTG 508227 Query 80382 ATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCT 80441 || | ||| | |||||||||||||| |||||||| || || ||||| | || || Sbjct 508226 GTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTACT 508167 Query 80442 CGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTC 80501 || || ||||| || | || | ||| || || | ||||| |||||| |||||| Sbjct 508166 GGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTC 508107 Query 80502 GCGCA---AATCTGA---CCAAAAATCAACCCCAACGCTGTGAC--CCCACATGTCGTGC 80553 || | || | ||||| ||| | ||| |||| |||||||||| | Sbjct 508106 TCGGAGGGGTTCCCAGTCCCAAAGGTCA----GAGGGCT-TGACATTCCACATGTCGAAC 508052 Query 80554 TGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTG 80613 || | || ||||| || || || || || ||| || ||| || || ||| ||| Sbjct 508051 TGGAGAATACCCTCAGAGGCAGGGGAGCCTTTGAAGGTGGAGTAGGGACCTTCCTCCTTA 507992 Query 80614 GCCAGCT-CACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTT 80672 || || | |||| || ||||||| ||||| || ||| ||| |||| |||||| Sbjct 507991 GCGAGTTGCACA-GATGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTT 507933 Query 80673 CACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAG 80732 || | || |||| || || || | || || | | ||| | ||||| || Sbjct 507932 CAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAG 507873 Query 80733 GCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCCGGAA 80791 || || || || | | || || ||||| ||| |||| | | || ||||| | | Sbjct 507872 ACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTT-GCTGTTACGAGCCTCTTGGA 507814 Query 80792 TTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACAT 80851 ||||| ||| ||||||| ||||| ||||| |||||| | || || | Sbjct 507813 CAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCT 507754 Query 80852 CATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTCACA---AATGCCGGAAGGC----TC 80904 | || || |||| |||||| | | ||||| | ||| |||||| | Sbjct 507753 CGTGCAGCTTCTTGAAGTCGTA-GCAAGCATCTTCATAGTTGATGAAAGAAGGCAGAGAC 507695 Query 80905 AGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTG 80964 | ||| || || ||||| || || ||||| |||| | | || | ||| || ||| Sbjct 507694 AAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTG 507635 Query 80965 CACAAATTAGAAGACTT--AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAG 81022 |||| || || ||| || ||||| ||||| || ||||| |||| ||||| Sbjct 507634 CACAGGTTGGA--GCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGATTGCAGT 507577 Query 81023 CGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCC 81082 ||||||||| |||| | ||| | |||||||| ||| | || || ||||||| || Sbjct 507576 GATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACC 507517 Query 81083 AAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAG 81142 ||| || | ||||||| |||||| || || || | | ||||| |||| Sbjct 507516 AAAGCTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACA 507457 Query 81143 CTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATC 81201 | || || | | |||||| | || |||| ||| | ||||| |||||||||||||| Sbjct 507456 GAGCCTCAAATTCGTCACCGTAGCAG-TCAGCAAGGCCAGGGCATTCGTTAGGGCACATG 507398 Query 81202 AGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCG 81261 || ||| ||| || |||| ||| |||||||||| ||||||||||| || || Sbjct 507397 AGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCT 507338 Query 81262 GTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAA 81319 ||||||||| || |||||| ||||||| | ||| ||||| || | || || | Sbjct 507337 AAGAACAGGTCACG--AGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGA 507280 Query 81320 AGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC-----CCCTTGC 81373 | || | || ||| || ||||||||||| || || | ||||| | || | |||| Sbjct 507279 ACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGT 507220 Query 81374 GACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGA 81433 | |||||||||| |||||||| ||||| ||| || ||||||| ||| || | || Sbjct 507219 TA---CCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGA 507163 Query 81434 TACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCT 81491 |||| | || ||| || ||||| |||| || || |||| || | | || Sbjct 507162 TACCGTTGGAAGTACCATTAGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGG 507103 Query 81492 GATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTC 81551 || || || || ||||| | | ||| |||||| ||||| || | ||| || Sbjct 507102 CGTTCAA--GCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTTTTGAGGGTATC 507045 Query 81552 ATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGG 81611 || || || || ||||| || | ||||| |||| | ||| || ||| | |||||| Sbjct 507044 GTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGG 506985 Query 81612 GCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGAC 81669 | | ||| ||||| ||||| | || ||| | || ||| |||| | | ||||| Sbjct 506984 --CTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGAC 506927 Query 81670 ATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACA 81729 || |||| || || ||| ||| || |||||||||||| || || | ||| || Sbjct 506926 ATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACT 506867 Query 81730 CGCATAAACATGTACTG-GGGCG 81751 ||||| | ||| | ||| ||||| Sbjct 506866 CGCATGATCATATGCTGCGGGCG 506844 >seq328 Length=334975 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | ||||||||||||||||| || |||||||||||| Sbjct 593 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACTATTACCCTCGAGGTTGAGTCATCC 534 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||| | || || |||||||||||||| || ||||| || ||| Sbjct 533 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAG 474 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| || || ||||| |||||||||| || ||||| | ||||| || Sbjct 473 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAAC 414 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || ||||| || || ||| | || ||||| ||||| Sbjct 413 ATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGCCTTCGTGGTGG 367 >seq219 Length=322996 Score = 170 bits (188), Expect = 2e-37 Identities = 178/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || || |||||||| || || || ||||| || || |||||||| ||||| Sbjct 33758 ATCATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 33699 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | ||||| || | ||| | || || |||||||||||||| || || || ||| Sbjct 33698 TCCGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGAC 33639 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTA 27581 |||||||| || || |||||||||||||| |||||||||| || ||||| ||| ||||| Sbjct 33638 CAGCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTA 33580 Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||||| ||||| | ||| | || ||||| ||||| Sbjct 33579 CAACATCCAGAAGGAGTCCACCCTTCACTTGGTCCTCCGCCTTCGTGGTGG 33529 >seq312 Length=363204 Score = 131 bits (144), Expect = 2e-25 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||| | || || |||||||||||||| || ||||| || |||||||| | ||||| || Sbjct 363204 AAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGATTGATTTTCGCC 363145 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 || ||||| |||||||| | ||| ||||| | ||||| || |||| |||||||| || Sbjct 363144 GGCAAGCAGCTCGAGGACGGTCGAACCCTCTCCGACTACAACATCCAGAAGGAATCAACC 363085 Query 27604 CTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 ||||| || ||| | |||||||| |||||||| Sbjct 363084 CTTCACCTGGTCCTTCGTCTTCGTGGTGGACA 363053 >seq316 Length=200512 Score = 127 bits (140), Expect = 2e-24 Identities = 298/446 (67%), Gaps = 4/446 (1%) Strand=Plus/Plus Query 31959 CAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATA 32018 || ||| || |||||| || |||||| ||||||| ||||||||||| || || Sbjct 185092 CATGCGATCTATTCCATCTGTTCTGGACGGATTCAAGCCCGGTCAGCGCAAGGTCATCTA 185151 Query 32019 CGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGT 32078 ||| ||| |||||| ||| || | |||| |||||| | | || | || || || Sbjct 185152 CGCGTGCTTCAAGAGAAACTTGATCAAAGACAAGAAGGTTGTTGAATTGGCAGGTTATGT 185211 Query 32079 GGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCT 32138 | | || || ||||| || |||||||| || ||| || || |||||| | ||| Sbjct 185212 GTCCGAACAGACGGCATACCACCACGGTGAACAGTCACTTCAACAGACCATTATTGGCCT 185271 Query 32139 TGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGG 32198 |||||||||||| || || | || ||| | |||| || || || |||| | || || Sbjct 185272 TGCTCAGAACTTCGTGGGCTCGAACAACATCAACTGCCTGGAACCCAGTGGAAACTTCGG 185331 Query 32199 GACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCG--TCTC 32256 | || || || ||||| |||||||| || | ||||||| |||||||| | || Sbjct 185332 TTCTCGACTTGCAGGTGGTTCTGATGCTGCCAGTCCTCGTTACACTTTCACCCGACTATC 185391 Query 32257 GCACCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTT 32316 || |||||| | ||||| || || |||| ||| || | || | || ||| | Sbjct 185392 GC-CCTTCG-CCCGCAAAATCTTTCACCCTATGGATGAGCCCAACCTGTTGCACCATTAT 185449 Query 32317 GATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTG 32376 || || || || ||||||| || | || || | ||||| ||| | |||| Sbjct 185450 GAAGATGGCAAGAAAATCGAGCCAATGGTATATGCCCCAATTCTTCCCATGGTACTGGTC 185509 Query 32377 AACGGTGCAGAAGGCATCGGAACGGG 32402 |||||||| || || || || || || Sbjct 185510 AACGGTGCCGATGGTATTGGCACAGG 185535 >seq337 Length=1491250 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || || ||||| || || |||||||| || || || ||||| ||||| || | ||| Sbjct 838273 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCTTCGGACACCATC 838332 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || || |||||||||||||| || || || || |||||||| | Sbjct 838333 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGATTG 838392 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || || || ||||| |||||||||| || ||||| | ||||| || |||| ||| Sbjct 838393 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAG 838452 Query 27595 G 27595 | Sbjct 838453 G 838453 >seq1 Length=1009051 Score = 100 bits (110), Expect = 3e-16 Identities = 257/386 (67%), Gaps = 9/386 (2%) Strand=Plus/Minus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGT 64719 || ||||| || ||||||||||| ||||| | || || | |||| ||||||| Sbjct 159307 AAGAAGGCGGATTGGGCCATCCGATGGATCCAGGATAAGAACTCTACCTTTGCTCAGCGT 159248 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 || | |||||||| || || || || ||||| || | || ||| || ||| Sbjct 159247 CTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTC 159188 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||||| || ||||| ||||| ||||| |||||| ||||| |||||||| || ||||| Sbjct 159187 TGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGT 159128 Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAA-GGACAAACC 64898 || ||||| || ||| || ||||| | ||| | |||||||| |||| || Sbjct 159127 GATGAGGGTCTTCACACCGACTTTGCCTGTCTCCTCCACTCTCACCTCAAGGGACGTGCC 159068 Query 64899 ATCACATGGGACTATAATTGATATAGTAAAATCG--GCTGTAGAAATTGAAAAGGAATTC 64956 | || | || || || || || | || || || ||||| |||| || Sbjct 159067 AGCA-AACAGATGATCCAGGACAT--TATCACCGATGCCGTTTCTATTGAGCAGGAGTTT 159011 Query 64957 ATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAGTAT 65016 |||||| || || || ||| || |||||||| | || | ||||| ||||| Sbjct 159010 CTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTAC 158951 Query 65017 ATCGAATTTGTAGCAGATCGCCTGCT 65042 |||||||| || || ||||| || || Sbjct 158950 ATCGAATTCGTCGCTGATCGTCTCCT 158925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307883505360