Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq219 140 8e-28 seq328 134 3e-26 seq337 111 4e-19 seq9 95.1 3e-14 >seq219 Length=322996 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| | ||| || ||||| || || |||| ||||| ||| || || Sbjct 33534 ACGAAGGCGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 33593 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||| ||||||||||| || ||||| || || ||||| Sbjct 33594 GCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATACC 33653 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || || |||||||| || | ||||| || | Sbjct 33654 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAG 33713 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| ||||| | || || | ||| | ||||| Sbjct 33714 GGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 33755 >seq328 Length=334975 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| ||||||||||| || || || |||| ||||| |||| | || Sbjct 372 ACGAAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 431 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || ||||| || | ||| || || || || || || || Sbjct 432 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCC 491 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||||||| ||||||||||| || | || || || | Sbjct 492 CTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGATGACTCAACCTCGAG 551 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| ||||| || || | ||| | ||||| Sbjct 552 GGTAATAGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 593 >seq337 Length=1491250 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| | |||| ||||| || |||||||| || |||||||| Sbjct 838451 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 838392 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | ||| || || || || || || || |||||||| |||||||| ||| ||| ||| Sbjct 838391 AATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 838332 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| || | || || || | ||||| ||||||||||||| || || | ||| Sbjct 838331 ATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 838273 >seq9 Length=510024 Score = 95.1 bits (104), Expect = 3e-14 Identities = 184/272 (68%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 193500 TTCTGGTTGTTCTTTCGACAGATGGCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCC 193559 || |||||| |||| ||| | | || ||||||| ||||| || | || ||| Sbjct 507601 TTTTGGTTGCTCTTGCGATTGCAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCT 507542 Query 193560 GCTTGAGCGACGAGAATGTGATGCCAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTTT 193619 | || || | |||||| | |||||| | ||||| || | | | | | |||| Sbjct 507541 GTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATAGACTTGCGACCCTTA 507482 Query 193620 CCTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGA 193679 || || |||||||||||||||||||| ||||||| || | |||||| || | || Sbjct 507481 CCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGG 507422 Query 193680 CCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCATG 193739 || || ||| || ||||| | |||| |||| || || | || || || | ||||||| Sbjct 507421 CCAGGGCATTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATG 507362 Query 193740 AAGAGGTCAGATGTCCAAATGGCGTAGAAAAG 193771 || || |||| |||||| || |||| || Sbjct 507361 AAAAGATCAGGGATCCAAAGAGCTAAGAACAG 507330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192525806404982