Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq9 178 2e-39 seq1 143 4e-29 >seq9 Length=510024 Score = 178 bits (196), Expect = 2e-39 Identities = 607/930 (65%), Gaps = 26/930 (3%) Strand=Plus/Minus Query 77685 GATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACAT 77744 || || || || ||||| || ||||||| || | | |||| || ||||| || || Sbjct 507691 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCAC 507632 Query 77745 AGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCA-TGAGTC 77803 || || | | ||| || || || || | |||||||||||| |||||| ||| || Sbjct 507631 AGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGATTGCAGTGA-TC 507573 Query 77804 CTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGAC 77863 ||| || || || || || | ||||| || |||| | || | ||| | | ||| | Sbjct 507572 CTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAA- 507514 Query 77864 GACTCT-AGCTTTTATCATAGATTTGTATCGCCT---CTCTCTTTCATA--TTGAGTATA 77917 | ||| ||| || || ||| ||| | | | |||||| || || || ||| | Sbjct 507513 GCTTCTGAGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACA 507457 Query 77918 TAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACAT 77977 |||| |||||||| || || | ||| | | ||||||||||| || |||||||| Sbjct 507456 GAGCC--TCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACAT 507399 Query 77978 CAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGC 78037 | | ||| || || | | || || || ||||| || |||||||| ||||| ||||| Sbjct 507398 GAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGC 507339 Query 78038 AATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAA 78097 | || || || || | | || || || || |||||| ||||| || || Sbjct 507338 TAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 507279 Query 78098 CTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATT 78157 ||| | | || | |||||||| || || || || || | | |||||||| || || Sbjct 507278 CTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTT 507219 Query 78158 ACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 78217 ||| ||||| || | || | || ||||| || | || | || ||| |||| ||||| Sbjct 507218 ACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACC 507159 Query 78218 GTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGA 78277 ||| || || ||||| || || | || ||| ||| | || || || | | | Sbjct 507158 GTTGGAAGTACCATTAGTACCGGCGATGTAAGAGCCAGTGGCACGGAT-TCGGTGGGCGT 507100 Query 78278 T-ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGA 78336 | | || || || || |||||||| || || | || ||| ||| | |||||||||| Sbjct 507099 TCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTTTTGAGGGTATCGTAGA 507040 Query 78337 TACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAA 78396 |||| || || ||||| ||| |||| | || ||| || || || | ||| | || Sbjct 507039 TACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTG 506980 Query 78397 CAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGAT 78456 ||| || || || ||||| || || |||||| || || | || || | || | Sbjct 506979 GAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGT 506920 Query 78457 TGTATGT-TTCAATA---GCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACG 78511 ||||||| | ||| | ||| | | | ||| || | ||||| || || || || Sbjct 506919 TGTATGTCTCCAAGACACGCTCAATAT-CGTCACCCCAG----ATTCCAACAGCGACTCG 506865 Query 78512 CATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTT 78571 ||| | ||||||||| || | ||| | | || | || | | |||||||||| | Sbjct 506864 CATGATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCTGTAGCAAGTATGATCT 506805 Query 78572 TTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601 ||| ||| || |||||||||||||| Sbjct 506804 GGACAAGGTTCGGAAGCCAAAATAGTTGTA 506775 >seq1 Length=1009051 Score = 143 bits (158), Expect = 4e-29 Identities = 370/561 (66%), Gaps = 12/561 (2%) Strand=Plus/Plus Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199 ||| ||||| || |||||||| ||||| | | ||| | ||||||||||| | || Sbjct 159098 ACAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAG 159157 Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259 ||| ||||| || ||||| || |||||||| || || | || || | || ||||| Sbjct 159158 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 159217 Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---G 48316 || || || ||||| ||||| || ||| | || | | | | | || | | Sbjct 159218 GATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAGTTCTTATCCTG 159277 Query 48317 TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 48376 ||||| || |||||||| |||||||| | ||||| || || || | || || Sbjct 159278 GATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTT 159337 Query 48377 AAAGAGAAAGtttttttCATTGCTA---TCTTTAACGTAAGTATCTATTAAAAGACTATA 48433 ||||| || | | | | | || || | ||| ||||| || | ||| || Sbjct 159338 GAAGAG---GTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGAGAGTA 159394 Query 48434 CATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGT 48493 |||||||||| || || || || ||||| || || || || |||| || || | Sbjct 159395 TGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGG 159454 Query 48494 GATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGC 48553 |||||| ||||| | ||||| ||| | | ||||||||| || || || || || Sbjct 159455 GATCTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGC 159514 Query 48554 AGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATT 48610 ||| || || || | | || || || |||| |||| ||||||| | || || Sbjct 159515 AGCGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTT 159574 Query 48611 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670 |||||| | || ||| || || | ||| | || ||||||||||| || || |||||||| Sbjct 159575 CCAGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGC 159634 Query 48671 TTTTTTATACATATTCCATAT 48691 || || ||||| | ||| || Sbjct 159635 CTTCTTGTACATTTGCCAGAT 159655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694665734773920