Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq9 172 8e-38 seq1 127 3e-24 >seq9 Length=510024 Score = 172 bits (190), Expect = 8e-38 Identities = 602/926 (65%), Gaps = 18/926 (2%) Strand=Plus/Minus Query 76280 GATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCAT 76339 || || || || ||||| || ||||||| || | |||| || ||||| ||||| Sbjct 507691 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCAC 507632 Query 76340 AGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACA-TGAGTC 76398 || || | ||| || ||||| || | |||||||||||| || || ||| || Sbjct 507631 AGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGATTGCAGTGA-TC 507573 Query 76399 CTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGAC 76458 ||| || || | || || |||| || || |||| | || | ||| | | ||| | Sbjct 507572 CTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAA- 507514 Query 76459 GACTCT-AGCTTTTATTATAGATTTGTATCGCTT---CTCTCTTTCATATTGT--GTATA 76512 | ||| ||| || || ||| ||| | ||| |||||| || || | | ||| | Sbjct 507513 GCTTCTGAGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACA 507457 Query 76513 TAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACAT 76572 | || |||||||| || || | ||| | | ||||| ||||| || || ||||| Sbjct 507456 GAGCC--TCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACAT 507399 Query 76573 CAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGC 76632 | | ||| || || | | || || || ||||| || |||||||| ||||| ||||| Sbjct 507398 GAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGC 507339 Query 76633 AATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAA 76692 | || || || || | | || || || || |||||| ||||| ||||| Sbjct 507338 TAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 507279 Query 76693 CTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATT 76752 ||| | | || | |||||||| || || || || || | |||| ||||| || || Sbjct 507278 CTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTT 507219 Query 76753 ACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCC 76812 ||| ||||| || | || | |||||||| || | || | || ||| |||| || || Sbjct 507218 ACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACC 507159 Query 76813 GTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGA 76872 ||| || |||||||| || || | || ||| ||| ||||| || | | | Sbjct 507158 GTTGGAAGTACCATTAGTACCGGCGATGTAAGAGCCAGTGGCACGGAT-TCGGTGGGCGT 507100 Query 76873 T-AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGA 76931 | | ||| || || || ||||| || || || | ||||| ||| | || || |||| Sbjct 507099 TCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTTTTGAGGGTATCGTAGA 507040 Query 76932 TGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAA 76991 | || || || || || ||| |||| | || ||| || || || | ||| | || Sbjct 507039 TACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTG 506980 Query 76992 CAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGAT 77051 ||| || || || || || || || |||||||||||| | || || | || | Sbjct 506979 GAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGT 506920 Query 77052 TGTATGTTTCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATC 77110 ||||||| || | || || ||||| || || |||| |||||||| ||||| Sbjct 506919 TGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGA-TTCCAACAGCGACTCGCATG 506861 Query 77111 AACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCC 77170 | ||||||||| || || || || | || | || | | |||||||||| | | Sbjct 506860 ATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCTGTAGCAAGTATGATCTGGAC 506801 Query 77171 AAAGTTTTAAAACCAAAATAGTTGTA 77196 || ||| || |||||||||||||| Sbjct 506800 AAGGTTCGGAAGCCAAAATAGTTGTA 506775 >seq1 Length=1009051 Score = 127 bits (140), Expect = 3e-24 Identities = 366/559 (65%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 ||| ||||| || ||||| || ||||| | | ||| | ||||||||||| | || Sbjct 159098 ACAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAG 159157 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 |||||||| || |||||||| |||||||| || || | || || | || ||||| Sbjct 159158 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 159217 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---G 46805 || || || || || || || || ||||| | || | | | | | |||| | Sbjct 159218 GATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAGTTCTTATCCTG 159277 Query 46806 AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865 ||||| | |||||||| ||||| || | ||||| || || || | || || Sbjct 159278 GATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTT 159337 Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACAT 46925 ||||| | | | || || || | || ||||| || | ||| || | Sbjct 159338 GAAGAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGAGAGTATGT 159397 Query 46926 TTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 46985 ||| || || ||||| || || ||||| || || || || |||| || || | || Sbjct 159398 TTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGAT 159457 Query 46986 CTGTACCTCTGTACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAG 47044 ||| ||||| | ||||| ||| |||| ||||||||| || || || || |||| Sbjct 159458 CTGGACCTCGCCGCTGAATCGCTCA-ACAAGATTCTCATTGACGATGCCGTCGGAGGCAG 159516 Query 47045 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT---TTATTCC 47101 | || || || | | || || || |||| || || | ||||| | || |||| Sbjct 159517 CGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCC 159576 Query 47102 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTT 47161 |||| | || ||| || || | ||| | || |||||||||||||| || |||||||| | Sbjct 159577 AGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCCT 159636 Query 47162 TTTTATACATATTCCATAT 47180 | || ||||| | ||| || Sbjct 159637 TCTTGTACATTTGCCAGAT 159655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712931254176960