Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq219 163 6e-35 seq328 159 7e-34 seq337 147 5e-30 seq312 100 6e-16 seq1 98.7 2e-15 seq9 84.2 5e-11 >seq219 Length=322996 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || |||| || | ||| || || |||||||||||||| Sbjct 33528 ACCACCACGAAGGCGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCT 33587 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || |||||||| | || || ||||| || Sbjct 33588 CAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGG 33647 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || ||| | || || ||||| |||| || || Sbjct 33648 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCAC 33707 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| ||||| | ||||| ||||| |||||||| Sbjct 33708 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 33755 >seq328 Length=334975 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | || || || |||||||||||||| | Sbjct 366 ACCACCACGAAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 425 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| || ||||| || || || ||| || Sbjct 426 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGG 485 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| ||||| || | || || Sbjct 486 GATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGATGACTCAAC 545 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || ||||| || ||||| ||||| ||||| |||||||| Sbjct 546 CTCGAGGGTAATAGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 593 >seq337 Length=1491250 Score = 147 bits (162), Expect = 5e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || || ||||||||||| || || || ||||| |||||| Sbjct 838451 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 838392 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 || || || || || || || ||||||||||| |||||||| | || || | ||| Sbjct 838391 AATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 838332 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||||||||| ||||| ||||| ||||| ||||| ||||||| ||||| ||||| Sbjct 838331 ATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 838273 >seq312 Length=363204 Score = 100 bits (110), Expect = 6e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| ||||| || | || ||| || |||||||||||||| | Sbjct 363056 CCACCACGAAGACGAAGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAG 363115 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || ||||| || || || ||||| || ||||| || || || ||| || Sbjct 363116 AGGGTTCGACCGTCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGG 363175 Query 282993 ATACCCTCCTTGTCTTGGATCTT 283015 || ||||||||||| |||||||| Sbjct 363176 ATGCCCTCCTTGTCCTGGATCTT 363198 >seq1 Length=1009051 Score = 98.7 bits (108), Expect = 2e-15 Identities = 172/251 (69%), Gaps = 7/251 (3%) Strand=Plus/Minus Query 230167 TCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTA 230226 |||| || | ||| | | ||| ||||||| || || ||| | ||||| || Sbjct 159042 TCACCGATGCCGTTTCTATTGAGCAGGAGTTTCTTACTGAGGCTCTCCCTTGTGCCCTGC 158983 Query 230227 TCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCG 230286 |||||||||| | | |||||| ||| || ||||||||||| ||||||||| | ||| Sbjct 158982 TCGGCATGAACTCCAACCTCATGAAGCAGTACATCGAATTCGTCGCTGATCGTCTCCTCG 158923 Query 230287 TGGCGCTA-------GGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATG 230339 | || || || ||||||| ||||| || |||| ||||| |||| || ||| Sbjct 158922 TTGCTCTCANNTCTCGGCAACGAGAAGGTGTACAAGTCCACCAACCCTTTCGACTTCATG 158863 Query 230340 GAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAA 230399 ||| ||| || || || || || ||||||||||| ||||| || || || || Sbjct 158862 GAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTTGCTGACTACCAG 158803 Query 230400 AGGCCCGGTGT 230410 | | ||||||| Sbjct 158802 AAGGCCGGTGT 158792 >seq9 Length=510024 Score = 84.2 bits (92), Expect = 5e-11 Identities = 188/280 (67%), Gaps = 2/280 (1%) Strand=Plus/Plus Query 299559 CATCGACGTCATGGCATACCCCATCAAAGAAGCGCAGA-CATCGAACATGCTGCGCCGCC 299617 ||||||||||| ||||| || |||| || | | || | ||||||| | ||| | Sbjct 507791 CATCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGC-AACATGCGTCACCGAC 507849 Query 299618 CCATCGGCGTGGGGGTACAAGGACTTCAGGATGTGTTCTTCAAACTGAAGCTCCCATTTG 299677 |||| || | || || ||||| ||| |||| ||| | || | || |||| Sbjct 507850 CCATTGGTCTTGGTGTGCAAGGTCTTGCTGATGCCTTCCTTGCCCTCCGCATGCCCTTTG 507909 Query 299678 ACTCTCCGGAGGCCAGGGATCTTAACCGGGAAATCTTCGAGCATATCTACTACGCTGCCG 299737 | ||||| ||||| | || || ||| | ||||||||||| |||||| |||||||| Sbjct 507910 AGTCTCCTGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACCACGCTGCCC 507969 Query 299738 TTGAAGCGTCGGTAGAACTCGCGGAAATCCACGGGCCTCACCCCACCTTCGAAGGGTCTC 299797 || | || || ||||||| | | || || || |||||||| |||| || | Sbjct 507970 TTACTACATCTGTGCAACTCGCTAAGGAGGAAGGTCCCTACTCCACCTTCAAAGGCTCCC 508029 Query 299798 CTGCAAGTAAGGGCATCCTCCAATACCACTTGTGGGATGT 299837 |||| | |||| || ||||| | | || ||||| |||| Sbjct 508030 CTGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAATGT 508069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046734465794862