Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq143 89.7 1e-12 >seq143 Length=1087375 Score = 89.7 bits (98), Expect = 1e-12 Identities = 265/405 (65%), Gaps = 34/405 (8%) Strand=Plus/Plus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 || ||||| |||| ||| |||| |||||||| ||||| || ||||| || |||| || Sbjct 86673 CTCCCTCACATGCTGTTCTACGGCCCTCCCGGTACAGGAAAAACGTCGACTGTCCTAGCA 86732 Query 254061 CTGGCCC-GAACCCTGTTGGGCGAGGGGAACATGAGAGAGC---GCGTGCTCGAGCTGAA 254116 ||||| | | | | ||| | | |||||| || | ||||| ||||| || Sbjct 86733 CTGGCGAAGGAGCTTTATGGTCCCG----ACATGATCAAGTCGAGAGTGCTTGAGCTCAA 86788 Query 254117 CGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGA-CTTTCTCCAAGA 254175 |||||| ||||| || || | | ||||||| || ||| |||||| |||| | | | Sbjct 86789 CGCTTCCGACGAGCGTGGCATCTCCATCGTCCGAGAAAAGGTCAAGAACTTTGCGCGA-A 86847 Query 254176 TGTCGATTTCGTCGTTCCAACCC---GG------------------CTGTCCGCCTTTCA 254214 || | ||| | | || |||| || ||| || || |||| Sbjct 86848 TG-CAATT--GACAAACCCACCCCCTGGATACAAAGACAAATATCCCTGCCCTCCGTTCA 86904 Query 254215 AGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCC 254274 || || | ||||| |||||||| ||| ||||||| || || ||| ||| || || | Sbjct 86905 AGATCATCATCCTCGACGAGGCCGACTCCATGACCCAAGATGCCCAGAGCGCACTACGAC 86964 Query 254275 GAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGA 254334 |||| ||||||||| || | | || ||||| || ||| | ||||||||||| | Sbjct 86965 GAACCATGGAGACGTACAGCAAGATCACTCGTTTCTGTCTGATTTGCAACTACGTCACTC 87024 Query 254335 AGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 ||| || | ||||| || ||| ||| || || ||||||| Sbjct 87025 GGATTATAGATCCGCTCGCCAGTCGATGCAGTAAATTCCGATTCA 87069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073762754227520