Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq8 145 1e-29 seq77 141 1e-28 >seq8 Length=2097948 Score = 145 bits (160), Expect = 1e-29 Identities = 370/559 (66%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123 ||| || || ||| ||| ||||||||||| | | ||| | ||||| ||||| | || Sbjct 771781 ACAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAG 771840 Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183 || ||||| ||||||||||| || ||||| || || || ||||| | || ||||| Sbjct 771841 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 771900 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATG 42240 ||| || || || || ||||| |||| ||| | || || | | | | || || Sbjct 771901 GATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAGTTCTTATCCTG 771960 Query 42241 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 42299 ||||| | || |||||||| ||||||||| | ||||| || || || | ||| | Sbjct 771961 GATCCATCGGATG-GCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGT 772019 Query 42300 TAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACA 42359 | ||||| || | | | || || | || |||||||| | ||| || Sbjct 772020 TGAAGAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGAGAGTATG 772079 Query 42360 TTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAA 42419 |||| || || ||||| || || ||||| || || ||||| |||| ||||||| | Sbjct 772080 TTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGA 772139 Query 42420 CCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTG 42479 ||| || || | ||||| ||| | | ||| || || || || ||||| ||| | Sbjct 772140 TCTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGCAG 772199 Query 42480 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT---TTATTCC 42536 | || || || | | || || || |||| ||||| | || ||| || |||| Sbjct 772200 CGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCC 772259 Query 42537 AATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCT 42596 | || | || ||| || || | ||| | || || | ||||| || || || ||||||| Sbjct 772260 AGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCCT 772319 Query 42597 TTTTATACATATTCCAGAT 42615 | || ||||| | |||||| Sbjct 772320 TCTTGTACATTTGCCAGAT 772338 >seq77 Length=567169 Score = 141 bits (156), Expect = 1e-28 Identities = 452/696 (65%), Gaps = 4/696 (1%) Strand=Plus/Minus Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033 ||||| ||||| || || ||||| | | ||| || || | | || || ||||| Sbjct 564484 CCAGGGCATTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATG 564425 Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093 || |||||||| ||||||||||||| || || || | | | |||||| || || Sbjct 564424 AAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCG 564365 Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153 |||||| ||||| |||||| | | | || | ||||| || || | ||| ||| Sbjct 564364 TGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATG 564305 Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213 || | | || || || ||||| || ||||| || | ||| | ||| ||||| || | Sbjct 564304 GCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAAC 564245 Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273 || | || ||| |||| ||||| ||||| | |||||| || |||| ||| || ||| Sbjct 564244 ACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTAGTACCGGCGATGTAAGAGCCA 564185 Query 72274 CTGGCACGAATATTGCTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 72332 ||||||| || | | | | | | || || || || ||||| || || || | || Sbjct 564184 GTGGCACGGAT-TCGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGC 564126 Query 72333 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 72392 || ||| | ||||| ||||| || || || || || ||| |||| | || || || Sbjct 564125 ACAAGTTTTGAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAA 564066 Query 72393 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 72452 || || | || | | ||| || || || ||||| || || || || || Sbjct 564065 GCATGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGT 564006 Query 72453 AAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGAT 72511 || | || |||| || ||||| ||||| | | || ||||| || Sbjct 564005 GAAGAACTTGCTTGACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCA 563946 Query 72512 GTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTA 72571 | ||||| || ||||| ||||| | ||||||||| || | ||| | || ||| | | Sbjct 563945 G-ATTCCAACAGCGACTCGCATGATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAA 563887 Query 72572 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 72631 | | | |||||| ||| | ||| ||| || |||||||||||||| ||||| | Sbjct 563886 TCTGTAGCAAGTATGATCTGGACAAGGTTCGGAAGCCAAAATAGTTGTAGTTGAAGTCGC 563827 Query 72632 GTTCGTAAATAATAACCGAATTGAGTTTATCCTTAT 72667 | || || | ||| | || | ||||| || |||| Sbjct 563826 GATCATAGACAATCGCTGAGTCGAGTTCCTCTTTAT 563791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671136976851400