Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq8 273 3e-68 seq77 118 2e-21 >seq8 Length=2097948 Score = 273 bits (302), Expect = 3e-68 Identities = 575/847 (68%), Gaps = 29/847 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||||||||| ||||| | || ||| ||||||| Sbjct 772338 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 772279 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | || |||||| | |||| | | || || || Sbjct 772278 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 772219 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 |||||| | || ||||| || | |||||| || |||||||| || ||||| ||||| || Sbjct 772218 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAG-CG 772160 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256 |||| ||| | || || |||| ||| ||||| || || ||||| ||||||| Sbjct 772159 ATTCAGCGGCGAGGTCCAGATCCCCGAGGC-TCGATGCTTCTATGGTTTCCAGATCATGA 772101 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG- 125315 | |||||| | ||||| |||| |||||| || || || | ||||| || || Sbjct 772100 TGGAGAACATCCACTCCGAAACATACTCTCTCCTCATCGATACCTACATCAAGGACCCTG 772041 Query 125316 --CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 || |||| | || ||||| ||||| | ||||| | || | || || || |||| Sbjct 772040 CCCAGCGTACATAC---CTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGAAGG 771984 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433 | | |||| || || |||||| | || | || ||| | | || | | || || | Sbjct 771983 CGGATTGGGCCATCCGATGGATCCAGGATAAGAACTCTACCTTTGCTCAGCGTCTTGTTG 771924 Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493 | || || ||||| ||||| |||||||| ||| ||||| ||||||| ||||||| Sbjct 771923 CTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCA 771864 Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 ||||||| || |||||||| || |||| ||||||| | || ||||| || |||| Sbjct 771863 AGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAGG 771804 Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGAT 125613 | || ||| ||||||||| ||| || | ||| | | | | || | | Sbjct 771803 GTCTTCACACCGACTTTGCCTGTCTCCT------CCACTCT---CACCTCAAGGGACGTG 771753 Query 125614 CCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673 ||||| | | | | || ||||| | ||||||||||| || || || ||||||| Sbjct 771752 CCAGCAAACAGATGATCCAGGACATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTC 771693 Query 125674 TAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACA 125733 | || || | || || | || | |||||||||| ||| || ||| |||||| Sbjct 771692 TTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACA 771633 Query 125734 TAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG--ATTGGC--CG-CAAGATTTACAA 125788 | || || || || |||||||| || |||| | ||| || ||| | ||||| Sbjct 771632 TCGAATTCGTCGCTGATCGTCTCCT-----CGTTGCTCTCGGCAACGAGAAGGTGTACAA 771578 Query 125789 CGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTT 125848 ||| || || || || |||||| | ||| || || | || ||||||||||| || Sbjct 771577 GTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTT 771518 Query 125849 CGAGAAG 125855 ||||||| Sbjct 771517 CGAGAAG 771511 >seq77 Length=567169 Score = 118 bits (130), Expect = 2e-21 Identities = 322/488 (66%), Gaps = 10/488 (2%) Strand=Plus/Plus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 || |||||| ||||| || || || || || || || | ||| ||||| | || || Sbjct 564261 CGTTACGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAGCCA 564320 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| ||||| || || || | || | || || ||| || || |||| Sbjct 564321 TGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTC 564380 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC 97043 || || | ||| |||| | || || ||| | || ||| | ||||||||||| ||| | Sbjct 564381 CGCGCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAG 564440 Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103 ||| | |||| || |||||||| || | || || || | || |||| Sbjct 564441 AGAAACGGCGAATGGACTCTCATGTGCCCTAACGAATGCCCTGGCCTTGCTGACTGCTAC 564500 Query 97104 GGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGA 97163 || || || |||||||| |||| |||||| |||||| || | | | | Sbjct 564501 GGTGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGG----TAAGGGTCGCAA 564556 Query 97164 GTCGATGCACG---AGAA-CTGTGGAAGGCCAT-CGTGACGGCTCAGGTAGAGACTGGAA 97218 ||| || | | |||| || ||| | ||||| | ||| ||| ||| |||||| |||| Sbjct 564557 GTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGA-GGCCCAGACAGAGACCGGAA 564615 Query 97219 CTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCA 97278 || | ||| |||||||||||| | |||||||| ||||||||| || | || | Sbjct 564616 ACCCTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGCAACCAAAAGAACCTTGGTA 564675 Query 97279 CCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGG 97338 ||||| ||||||| |||||||| || || | || ||| | | || || ||| | Sbjct 564676 CCATCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCG 564735 Query 97339 CAGTTTGC 97346 | |||||| Sbjct 564736 CTGTTTGC 564743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741056745241400