Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq77 370 3e-97 seq8 104 6e-17 >seq77 Length=567169 Score = 370 bits (410), Expect = 3e-97 Identities = 1141/1738 (66%), Gaps = 40/1738 (2%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 |||| ||| ||||||||||||||| | ||||| || ||| |||| ||| | ||| Sbjct 563898 ATTGCTGAGCGCCCGCAGCATATGATCATGCGAGTCGCTGTTGGAATCTGGGGTGACGAT 563957 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGCACGCCA 363559 |||| | | || ||||| || || | | | || || | ||||| || || | Sbjct 563958 ATTGAGCGTGTCTTGGAGACATACAACCTCATGTCAA-GCAAGT-TCTTCACTCATGCAA 564015 Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619 || || | | ||| || || |||| | || ||| | || || ||||| ||| | Sbjct 564016 GCCCCACTTTATTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTG 564075 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 | |||||||| || ||| || ||||||| || || || || | |||||| | |||| Sbjct 564076 ATATGAAGGAGGACAGCATTGATGGTATCTACGATACCCTCAAAACTTGTGCCATGATTT 564135 Query 363680 CCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTA 363737 |||||| || || || ||||| | | || |||| | ||||| || | | ||| Sbjct 564136 CCAAGATGGCTGGTGGTATTGGCTTGAACGC-CCACCGAATCCGTGCCACTGG-CTCTTA 564193 Query 363738 CATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 ||| ||| || || |||| | || || | ||||||||||| |||||||| ||| Sbjct 564194 CATCGCCGGTACTAATGG-TACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACA 564252 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856 | ||||| | ||||| ||||||||||| ||||| || || || || || || | Sbjct 564253 ACACTGCTCGTTACGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACC 564312 Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAG 363916 | ||||| || ||||| | || ||||| ||||| ||||| || ||| || || | Sbjct 564313 TTGAGCCATGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGG 564372 Query 363917 AGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGC 363976 |||| | || || ||||| ||||||| || |||||| | |||| | ||| ||||||| Sbjct 564373 AGGAGGTCCGCGCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGC 564432 Query 363977 GCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC 364035 | || ||| | | |||| || | ||| | ||||| ||||||| || || ||| | Sbjct 564433 GTGTCGAGAGAAACGGCGAAT-GGACTCTCATGTGCCCTAACGAATGCCCTGGCCTTGCT 564491 Query 364036 GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT 364095 || | |||||||| | || ||||| ||||||||||| || ||||| |||| | Sbjct 564492 GACTGCTACGGTGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGTAAGGGT 564551 Query 364096 CGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACA 364155 || ||| | || || |||||||| |||| ||||| | || | |||| ||||| Sbjct 564552 CGCAAGTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACAGAGACC 564611 Query 364156 GGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCT 364214 |||| ||||| | ||| | ||||| ||| ||||| |||||| |||||| || |||| Sbjct 564612 GGAA-ACCCTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGCAACCAAAAGAACCT 564670 Query 364215 TGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACG 364273 |||||| | || | || |||||| || || ||||| ||||||||| ||| || || | Sbjct 564671 TGGTACCA-TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGATG 564729 Query 364274 AGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA------AAGATG 364327 || || || || |||||||| || | | || || | || | | |||||| Sbjct 564730 AGGTCGCTGTTTGCAACCTTGCCTCCTTGTCTCTGCCTTCTTTCATCAACTATGAAGATG 564789 Query 364328 GTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACA 364387 | | ||| | || | || | || || || | || | ||||| | ||| Sbjct 564790 CTTGCTACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTTGTTGTCCGCAATTTGAACA 564849 Query 364388 AGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCG 364442 || | |||||| || | || || | | || || || ||| || ||||| Sbjct 564850 AGATCATCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGC-----AACATGCG 564904 Query 364443 TCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGAT 364502 ||| || || |||||||||||||| || || || ||||| | || | ||| || Sbjct 564905 TCACCGACCCATTGGTCTTGGTGTGCAAGGTCTTGCTGATGCCTTCCTTGCCCTCCGCAT 564964 Query 364503 GGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTT 364562 | | ||||| || ||||| ||||||| || || ||| | ||||| || || || || Sbjct 564965 GCCCTTTGAGTCTCCTGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACCA 565024 Query 364563 TGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATG 364621 || || | ||| | || |||| | | || || | || ||||| || | Sbjct 565025 CGCTGCCCTTACTACATC-TGTGCAACTCGCTAAGGAGGAAGGTCCCTACTCCACCTTCA 565083 Query 364622 AGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTG 364681 | || |||||| || |||| | ||||||| || | |||||||||| ||| |||| Sbjct 565084 AAGGCTCCCCTGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAATGTCAAGCCCTCTG 565143 Query 364682 TCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC 364739 || ||| ||||||| | || || | || |||| || |||| |||||| || Sbjct 565144 ACCTTTGGGACTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTC 565203 Query 364740 -CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGT 364798 |||||| || || ||||| || || ||| | ||||| || || |||||||| | Sbjct 565204 TGCTCGTT---GCTCCTATGCCTACCGCCAGTACCTCGCAGATTCTTGGCAACAACGAAT 565260 Query 364799 GCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGG 364858 |||| || || | || ||| | || |||||| || ||| | || || || | || Sbjct 565261 GCTTTGAGCCTTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAGG 565320 Query 364859 TAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGA 364918 | || || | || ||||||||||| |||| || || ||| || |||| Sbjct 565321 TTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTATGA 565380 Query 364919 AGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATC 364978 ||||| ||||| || | ||| |||||| | |||||||| || | || | || Sbjct 565381 AGAACCGCATCATTGCTGATAACGGTTCTATCCAGAACATCCCCAACATCCCTGCCGAGA 565440 Query 364979 TGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGG 365038 | ||| || | ||||| || || ||||| ||||| |||| | | | ||||| | Sbjct 565441 TCAAGGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGGCTG 565500 Query 365039 CCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAA 365098 | || || ||||| || || |||| ||||| | ||| | ||||| | || | Sbjct 565501 CTGACCGTGGTGCCTTCATTGATCAGTCTCAGTCTCTCAACATTCACATGAAGGACCCTA 565560 Query 365099 CCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 || | |||| | || |||||| ||| || ||||| |||||| ||||| || Sbjct 565561 CCATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAGACTGG 565618 >seq8 Length=2097948 Score = 104 bits (114), Expect = 6e-17 Identities = 311/468 (66%), Gaps = 23/468 (5%) Strand=Plus/Minus Query 22190 ACGAACAACATTTTATCAAATATATTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTT 22249 |||| ||| | || ||| | ||||| || ||||| ||| || | ||||| || || Sbjct 772238 ACGAGCAATACTTCATCTCCCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCA 772179 Query 22250 TTGAGAATCTAGT-GACTAATTTTGCATCTGAAATTCAATACCCAGAGGCCAGATGTTTC 22308 ||||||||| || || ||| || | || | || ||| ||||| |||| ||| Sbjct 772178 ATGAGAATCTTGTTGAGCGATTCAGCGGC-GAGGTCCAGATCCCCGAGGCTCGATGCTTC 772120 Query 22309 TATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACATATTCTATGATGCTACAG 22368 |||||| | || || ||||| || || | ||| | |||||||| ||| || | Sbjct 772119 TATGGTTTCCAGATCATGATGGAGAACATCCACTCCGAAACATACTCT------CTCC-- 772068 Query 22369 TCACTCG-TAGA-AGATAAAG-AC---GAACAACGAA---ACTTATTCCGCGCGATTCGC 22419 ||| ||| || | || ||| || | || || | || | ||| ||| || | Sbjct 772067 TCA-TCGATACCTACATCAAGGACCCTGCCCAGCGTACATACCTCTTCAACGCCGTTGAC 772009 Query 22420 ACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAAT--GAAC 22477 || |||| | || || ||||| |||||||| | |||||| | || |||| Sbjct 772008 ACTATTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAGGATAAGAAC 771949 Query 22478 GTT-CATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGA 22536 | | || || | |||||| |||| ||||||| ||||| || || ||||| || Sbjct 771948 TCTACCTTTGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGT 771889 Query 22537 GCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCA 22596 || ||| | | ||||| ||||| || || |||| | ||||| ||||| | ||||| Sbjct 771888 GCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCT 771829 Query 22597 AATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644 || ||| | ||| || |||||||||||||| ||||| ||||| ||| Sbjct 771828 AACGAGCTCATTTCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGT 771781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303349174707230