Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31]
265 sequences; 36,526,733 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq227 129 6e-25
seq92 114 1e-20
seq36 95.1 1e-14
>seq227
Length=372751
Score = 129 bits (142), Expect = 6e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || || || | ||| |||||||| || |||||||| ||||||
Sbjct 137113 CCACCACGAAGGCGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 137172
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| |||||||| || || |||| | |||||||||||||| |||
Sbjct 137173 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGG 137232
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 137233 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 137292
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|| | ||| | || || || || || || || ||||||||||||||||
Sbjct 137293 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATGA 137341
>seq92
Length=1659281
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
||||||||||| || |||||||| ||| | |||||| ||||| |||||||||||
Sbjct 963222 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 963281
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| | || || |||||||| || |||||||| || || ||||| ||| || |||
Sbjct 963282 GCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTC 963341
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | || |||| ||||| | |||| ||||| || || ||||| | ||
Sbjct 963342 ACATTGTCGATGGTGTCGGATGACTCAACCTCGAGGGTAATAGTCTTGCCGGTCAAGGTC 963401
Query 131218 TTTACGAAAATCTGCATG 131235
|| ||||| |||||||||
Sbjct 963402 TTGACGAAGATCTGCATG 963419
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | ||| || ||||| || |||||||| |||
Sbjct 962683 CCACCACGAAGACGAAGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAG 962742
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| ||||||||||| ||| | || || |||||||| || ||||||
Sbjct 962743 AGGGTTCGACCGTCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGG 962802
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||| | | || | || |||| |||||||
Sbjct 962803 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGATGACTCGACC 962862
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || || || || || || ||||| || |||||
Sbjct 962863 TCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 962909
Score = 107 bits (118), Expect = 2e-18
Identities = 136/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
||||||||||| ||||||||||| ||| | |||||| ||||| |||||||||||
Sbjct 962941 GTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 963000
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| | || || |||||||| || |||||||| || || ||||| ||| || ||||
Sbjct 963001 GCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 963060
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | ||| |||| ||||||| || | ||||| || || || || | ||
Sbjct 963061 ACGTTGTCGATAGTGTCGGATGACTCGACCTCAAGGGTAATAGTCTTGCCAGTCAAGGTC 963120
Query 131218 TTTACGA 131224
|| ||||
Sbjct 963121 TTGACGA 963127
>seq36
Length=1468341
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| | ||| || ||||| ||||||||||| ||| |||
Sbjct 1090381 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 1090322
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| || |||||||| ||||| ||||| || || ||||| ||| || ||||| | |
Sbjct 1090321 TCAATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1090262
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | ||||||| |||| ||| | ||| || || || || || || ||||
Sbjct 1090261 CGATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 1090202
Query 131225 AA 131226
||
Sbjct 1090201 AA 1090200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472011236457600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |