Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq77 154 2e-32 seq8 150 2e-31 >seq77 Length=567169 Score = 154 bits (170), Expect = 2e-32 Identities = 624/971 (64%), Gaps = 14/971 (1%) Strand=Plus/Minus Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCA 62811 || || || || ||||| || ||||||| || | ||| |||| || ||||||||||| Sbjct 564754 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGC-GCAGTATTCAATGATCTCAGTGCA 564696 Query 62812 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 62871 || || | |||||| || | || | ||| || ||||| || || ||| Sbjct 564695 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGATTGCAGTGATC 564636 Query 62872 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 62931 ||| || || ||||| || | || || || |||| | || | ||| || | ||| | Sbjct 564635 CTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAA- 564577 Query 62932 GACTC-GAGCCTTTATTATAGATTTGTATCTCTTT---TCTCTTTCGTATAGTGTATACA 62987 | || ||||||| || ||| ||| | ||| ||||| ||||| | |||| Sbjct 564576 GCTTCTGAGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACA 564520 Query 62988 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCA 63047 || || ||||| || | | | || ||||| ||||| | || ||||| | Sbjct 564519 GAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGA 564460 Query 63048 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 63107 | ||| || |||| || || || ||||| || |||||||| ||||||||||||| Sbjct 564459 GAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTA 564400 Query 63108 TAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 63167 || || || | | | ||||| || || |||||| ||||| |||||| Sbjct 564399 AGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACT 564340 Query 63168 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 63227 | | | || | ||||| || || | ||| ||||| | | ||||| || ||||| | Sbjct 564339 CGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTAC 564280 Query 63228 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 63287 | ||||| || | ||| | ||| ||||| || | || | || ||| |||| ||||| | Sbjct 564279 CACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGT 564220 Query 63288 TGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT- 63346 |||| |||||||| || || | ||| || ||| ||||||| || | | | | Sbjct 564219 TGGAAGTACCATTAGTACCGGCGATGTAAGAGCCAGTGGCACGGAT-TCGGTGGGCGTTC 564161 Query 63347 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 63406 | || || || || ||||| || || || | || || ||| | ||||| ||||| Sbjct 564160 AAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTTTTGAGGGTATCGTAGATA 564101 Query 63407 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 63466 || || || || || ||| |||| | || || || || || | || | | | Sbjct 564100 CCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGA 564041 Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTG 63526 || || || || ||||| || || || ||||| || | || || | || ||| Sbjct 564040 GTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTG 563981 Query 63527 TACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAA 63585 || ||||| | | || ||||| || | ||||| || ||||| ||||| | Sbjct 563980 TATGTCTCCAAGACACGCTCAATATCGTCACCCCAG-ATTCCAACAGCGACTCGCATGAT 563922 Query 63586 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63645 ||| ||||| || | ||| | || ||| || || | | |||||| ||| | ||| Sbjct 563921 CATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCTGTAGCAAGTATGATCTGGACAA 563862 Query 63646 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705 ||| || |||||||||||||| ||||| || || || | ||| | |||| ||| Sbjct 563861 GGTTCGGAAGCCAAAATAGTTGTAGTTGAAGTCGCGATCATAGACAATCGCTGAGTCGAG 563802 Query 63706 TTTATCCTTAT 63716 || || |||| Sbjct 563801 TTCCTCTTTAT 563791 >seq8 Length=2097948 Score = 150 bits (166), Expect = 2e-31 Identities = 371/559 (66%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||| || || ||| ||| |||||||| || | | ||| | ||||| ||||| | || Sbjct 771781 ACAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAG 771840 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 || ||||| ||||||||||| || ||||| || ||||| ||||| | || ||||| Sbjct 771841 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 771900 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---G 32836 || || || || || ||||| |||| ||| | || || | | | | | || | Sbjct 771901 GATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAGTTCTTATCCTG 771960 Query 32837 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCAT 32895 ||||| | || |||||||| ||||||||| | ||||| || || || | || | Sbjct 771961 GATCCATCGGATG-GCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGT 772019 Query 32896 TAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACA 32955 | ||||| || | | | || || | || ||||| || | ||| || Sbjct 772020 TGAAGAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGAGAGTATG 772079 Query 32956 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAA 33015 |||| || || ||||| || || || || || || |||||||||| |||||||| | Sbjct 772080 TTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGA 772139 Query 33016 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 33075 |||| || || | ||||| || | | ||| ||||| || || ||||| ||| | Sbjct 772140 TCTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGCAG 772199 Query 33076 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCC 33132 | || || || | | || || || |||| ||||||| || | | || |||| Sbjct 772200 CGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCC 772259 Query 33133 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192 | || | || ||| || || | ||| | || || ||||||| || || |||||||||| Sbjct 772260 AGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCCT 772319 Query 33193 TTTTATACATATTCCAGAT 33211 | || ||||| | |||||| Sbjct 772320 TCTTGTACATTTGCCAGAT 772338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629901094000