Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq8 114 3e-20 seq92 102 2e-16 seq65 95.1 2e-14 >seq8 Length=2097948 Score = 114 bits (126), Expect = 3e-20 Identities = 398/615 (65%), Gaps = 17/615 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | || ||||| ||||||||||||||| ||||| ||| Sbjct 771515 TCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATGAAGTCGAAAGGGTTGGTG 771574 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | |||||| ||| | ||| || || |||| || || || || || || || | Sbjct 771575 GACTTGTACACCTTCTCGTTGCCGAGAGCAACGAGGAGACGATCAGCGACGAATTCGATG 771634 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||| || | ||||||||||| | || |||||| | |||||| | Sbjct 771635 TACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGGGCACAAGGGAGAGCCTCAGTAAGA 771694 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG-TGCCAGAGA 251798 || |||| || | | ||| || || | ||| ||| ||| ||| | | | | Sbjct 771695 AACTCCTGCTCAATAGAAACGGCATCGGTGATAATGTCCTGGATCATCTGTTTGCTGGCA 771754 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858 | | || || | |||| ||||| | |||| | ||| |||||||| || Sbjct 771755 CGTC----CCTTGAGGTGAGAGTGGAGGAGACAGGCAAAGTCGGTGTGAAGACCCTCATC 771810 Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918 ||| |||| |||||| || | | ||| |||||||| | ||||| ||| ||||||| Sbjct 771811 ACGAGAAATGAGCTCGTTAGAAAAGCTCAGACCAGGCATGAGGCCACGCTTCTTGAGCCA 771870 Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAG 251978 |||||| | ||||| || ||| | | |||||| || | | |||||||| Sbjct 771871 GAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACCCTCAACGGCAGCAAAAGCAACAAG 771930 Query 251979 GCGCTCAGCAAACG------ACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTT 252032 |||| |||||| | ||| ||||| || | | || ||||| | ||||| Sbjct 771931 ACGCTGAGCAAAGGTAGAGTTCTTATCCTG-GA-TCCATCGGATG-GCCCAATCCGCCTT 771987 Query 252033 CTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTC 252092 ||||| | || || || || | || | ||||| | | |||| |||| ||| Sbjct 771988 CTTTCGGATGCAAGGAATAGTGTCAACGGCGTTGAAGAGGTATGTACGCTGGGCAGGGTC 772047 Query 252093 CTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACAT 252152 || |||| | ||| | ||||||||||| | || || |||||| || | | || Sbjct 772048 CTTGATGTAGGTATCGATGAGGAGAGAGTATGTTTCGGAGTGGATGTTCTCCATCATGAT 772107 Query 252153 CTGGTAAGCATAGAA 252167 |||| || ||||||| Sbjct 772108 CTGGAAACCATAGAA 772122 >seq92 Length=1659281 Score = 102 bits (112), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 279695 AGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACT 279754 ||| || |||||||| || ||||||||||||||||||||| | | || || || || | Sbjct 127534 AGTTGGATCTCTGTCTGGAGGTTGGAAGATGAAGCTGGCCTTGGCCCGTGCTATGCTGCA 127593 Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGC 279814 ||| || |||||||| || ||||| || || || ||||| | ||| ||||| | || Sbjct 127594 GCGCGCTGATGTCCTTCTTCTTGACGAACCTACTAACCATCTTGACGTTGCCAACATTGC 127653 Query 279815 CTGGCTAGTGTCCTACCTAACCAGTCTGA--AGAATGTTTCTTCCCTCATTGTCTCTCAC 279872 ||||| | | |||||| | ||||| | | || | || ||||| |||||| Sbjct 127654 ATGGCTCGAGAACTACCT--CAAGTCTCACCCCGACATTACCAGTCTTATTGTTTCTCAC 127711 Query 279873 GACTCTGGCTTC 279884 |||||||||||| Sbjct 127712 GACTCTGGCTTC 127723 >seq65 Length=1013906 Score = 95.1 bits (104), Expect = 2e-14 Identities = 158/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 ||||||||||| || ||||| ||||| || || || |||| |||||||| || ||| Sbjct 589400 GGTGAGGATCTTTGCAACTGTACCTTCTCTCTTGCCTACGGTGCCAAGATTCTTCTCAAC 589459 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | |||| |||||||||| | || || ||||| |||||||| || | Sbjct 589460 CAGACTCACCTCCGTCTCAAGCGTGGTCAGCGTTACGGTCTTTGTGGTCCCAACGGTTCC 589519 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| ||| || ||||||||||| |||| ||| | | ||| ||||| | ||| Sbjct 589520 GGAAAGTCCACCCTCATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 589578 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCT 279569 ||||| | ||| || | || ||||||||| | |||||| || Sbjct 589579 GGACGAGGTCAAGACTGTCTTCGTCGAGCACGACTTGGACTCCGCT 589624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027833310172865